Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.34□□□□□ -0.11
LCMT2O60294 GPR53P-205ENST00000457298 1084 ntBASIC14.34□□□□□ -0.11
LCMT2O60294 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.34□□□□□ -0.11
LCMT2O60294 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.34□□□□□ -0.11
LCMT2O60294 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.34□□□□□ -0.11
LCMT2O60294 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LCMT2O60294 AC138951.2-201ENST00000623455 1161 ntBASIC14.34□□□□□ -0.11
LCMT2O60294 RHOXF1P1-202ENST00000635473 501 ntBASIC14.34□□□□□ -0.11
LCMT2O60294 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.34□□□□□ -0.11
LCMT2O60294 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LCMT2O60294 AC011840.2-201ENST00000563063 1520 ntBASIC14.34□□□□□ -0.11
LCMT2O60294 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.34□□□□□ -0.11
LCMT2O60294 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.34□□□□□ -0.11
LCMT2O60294 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.34□□□□□ -0.11
LCMT2O60294 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.34□□□□□ -0.11
LCMT2O60294 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.34□□□□□ -0.11
LCMT2O60294 AL390755.1-201ENST00000623716 2027 ntBASIC14.34□□□□□ -0.11
LCMT2O60294 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LCMT2O60294 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.34□□□□□ -0.11
LCMT2O60294 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
LCMT2O60294 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LCMT2O60294 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.33□□□□□ -0.11
LCMT2O60294 LINC00552-201ENST00000625151 2579 ntBASIC14.33□□□□□ -0.11
LCMT2O60294 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LCMT2O60294 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LCMT2O60294 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.33□□□□□ -0.11
LCMT2O60294 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.33□□□□□ -0.11
LCMT2O60294 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
LCMT2O60294 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LCMT2O60294 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LCMT2O60294 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LCMT2O60294 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.33□□□□□ -0.12
LCMT2O60294 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LCMT2O60294 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.33□□□□□ -0.12
LCMT2O60294 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LCMT2O60294 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
LCMT2O60294 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LCMT2O60294 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LCMT2O60294 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 MIR1202-201ENST00000408529 83 ntBASIC14.33□□□□□ -0.12
LCMT2O60294 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.33□□□□□ -0.12
LCMT2O60294 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LCMT2O60294 AC026954.1-201ENST00000429771 1293 ntBASIC14.33□□□□□ -0.12
LCMT2O60294 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.33□□□□□ -0.12
LCMT2O60294 FAM8A4P-201ENST00000435433 1213 ntBASIC14.33□□□□□ -0.12
LCMT2O60294 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.33□□□□□ -0.12
LCMT2O60294 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LCMT2O60294 AC022210.1-201ENST00000449856 793 ntBASIC14.33□□□□□ -0.12
LCMT2O60294 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.33□□□□□ -0.12
LCMT2O60294 AC119751.2-201ENST00000504529 210 ntBASIC14.33□□□□□ -0.12
LCMT2O60294 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.33□□□□□ -0.12
LCMT2O60294 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.33□□□□□ -0.12
LCMT2O60294 AC106820.3-201ENST00000561653 397 ntBASIC14.33□□□□□ -0.12
LCMT2O60294 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.33□□□□□ -0.12
LCMT2O60294 MIR4259-201ENST00000584466 101 ntBASIC14.33□□□□□ -0.12
LCMT2O60294 AC138696.2-201ENST00000607376 223 ntBASIC14.33□□□□□ -0.12
LCMT2O60294 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.33□□□□□ -0.12
LCMT2O60294 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LCMT2O60294 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.33□□□□□ -0.12
LCMT2O60294 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.33□□□□□ -0.12
LCMT2O60294 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
LCMT2O60294 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
LCMT2O60294 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
LCMT2O60294 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCMT2O60294 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LCMT2O60294 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LCMT2O60294 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.32□□□□□ -0.12
LCMT2O60294 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCMT2O60294 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms