Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.3□□□□□ -0.44
SSSCA1O60232 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.29□□□□□ -0.44
SSSCA1O60232 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.29□□□□□ -0.44
SSSCA1O60232 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SSSCA1O60232 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SSSCA1O60232 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.29□□□□□ -0.44
SSSCA1O60232 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.29□□□□□ -0.44
SSSCA1O60232 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.29□□□□□ -0.44
SSSCA1O60232 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SSSCA1O60232 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.29□□□□□ -0.44
SSSCA1O60232 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.29□□□□□ -0.44
SSSCA1O60232 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SSSCA1O60232 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.29□□□□□ -0.44
SSSCA1O60232 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.29□□□□□ -0.44
SSSCA1O60232 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SSSCA1O60232 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.29□□□□□ -0.44
SSSCA1O60232 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.29□□□□□ -0.44
SSSCA1O60232 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SSSCA1O60232 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.29□□□□□ -0.44
SSSCA1O60232 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.29□□□□□ -0.44
SSSCA1O60232 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.29□□□□□ -0.44
SSSCA1O60232 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.29□□□□□ -0.44
SSSCA1O60232 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.29□□□□□ -0.44
SSSCA1O60232 AC034105.1-201ENST00000563488 319 ntBASIC12.29□□□□□ -0.44
SSSCA1O60232 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.29□□□□□ -0.44
SSSCA1O60232 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.29□□□□□ -0.44
SSSCA1O60232 AC092865.6-201ENST00000642101 219 ntBASIC12.29□□□□□ -0.44
SSSCA1O60232 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.29□□□□□ -0.44
SSSCA1O60232 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SSSCA1O60232 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SSSCA1O60232 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.29□□□□□ -0.44
SSSCA1O60232 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SSSCA1O60232 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SSSCA1O60232 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSSCA1O60232 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.28□□□□□ -0.44
SSSCA1O60232 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.28□□□□□ -0.44
SSSCA1O60232 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SSSCA1O60232 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.28□□□□□ -0.44
SSSCA1O60232 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
SSSCA1O60232 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.28□□□□□ -0.44
SSSCA1O60232 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
SSSCA1O60232 KRT8P24-201ENST00000560290 1559 ntBASIC12.28□□□□□ -0.44
SSSCA1O60232 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SSSCA1O60232 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SSSCA1O60232 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 AC004870.1-201ENST00000315132 882 ntBASIC12.28□□□□□ -0.44
SSSCA1O60232 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.28□□□□□ -0.44
SSSCA1O60232 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SSSCA1O60232 MRPL3P1-201ENST00000400109 1033 ntBASIC12.28□□□□□ -0.44
SSSCA1O60232 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 FAM58CP-201ENST00000435741 640 ntBASIC12.28□□□□□ -0.44
SSSCA1O60232 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.28□□□□□ -0.44
SSSCA1O60232 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.28□□□□□ -0.44
SSSCA1O60232 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.28□□□□□ -0.44
SSSCA1O60232 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.28□□□□□ -0.44
SSSCA1O60232 KRT8P48-201ENST00000515599 1220 ntBASIC12.28□□□□□ -0.44
SSSCA1O60232 RNA5SP419-201ENST00000515908 135 ntBASIC12.28□□□□□ -0.44
SSSCA1O60232 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.28□□□□□ -0.44
SSSCA1O60232 LINC01225-203ENST00000563550 1244 ntBASIC12.28□□□□□ -0.44
SSSCA1O60232 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
SSSCA1O60232 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.28□□□□□ -0.44
SSSCA1O60232 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.28□□□□□ -0.44
SSSCA1O60232 AC026120.1-201ENST00000611536 926 ntBASIC12.28□□□□□ -0.44
SSSCA1O60232 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSSCA1O60232 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms