Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CHMP2AO43633 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.86■□□□□ 0.29
CHMP2AO43633 MIR4683-201ENST00000579659 81 ntBASIC16.86■□□□□ 0.29
CHMP2AO43633 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.86■□□□□ 0.29
CHMP2AO43633 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CHMP2AO43633 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CHMP2AO43633 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CHMP2AO43633 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CHMP2AO43633 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
CHMP2AO43633 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CHMP2AO43633 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP2AO43633 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP2AO43633 SALL4P5-201ENST00000419001 1760 ntBASIC16.85■□□□□ 0.29
CHMP2AO43633 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP2AO43633 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP2AO43633 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP2AO43633 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 RN7SKP230-201ENST00000365642 335 ntBASIC16.85■□□□□ 0.29
CHMP2AO43633 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP2AO43633 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 AC007969.1-201ENST00000433675 447 ntBASIC16.85■□□□□ 0.29
CHMP2AO43633 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CHMP2AO43633 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP2AO43633 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP2AO43633 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CHMP2AO43633 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.85■□□□□ 0.29
CHMP2AO43633 RN7SL219P-201ENST00000582872 296 ntBASIC16.85■□□□□ 0.29
CHMP2AO43633 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.85■□□□□ 0.29
CHMP2AO43633 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.85■□□□□ 0.29
CHMP2AO43633 AC138696.2-201ENST00000607376 223 ntBASIC16.85■□□□□ 0.29
CHMP2AO43633 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.85■□□□□ 0.29
CHMP2AO43633 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.85■□□□□ 0.29
CHMP2AO43633 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
CHMP2AO43633 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP2AO43633 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP2AO43633 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP2AO43633 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP2AO43633 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.84■□□□□ 0.29
CHMP2AO43633 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP2AO43633 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHMP2AO43633 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP2AO43633 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP2AO43633 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.84■□□□□ 0.29
CHMP2AO43633 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CHMP2AO43633 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.84■□□□□ 0.29
CHMP2AO43633 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP2AO43633 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.84■□□□□ 0.29
CHMP2AO43633 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.84■□□□□ 0.29
CHMP2AO43633 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.84■□□□□ 0.29
CHMP2AO43633 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP2AO43633 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.84■□□□□ 0.29
CHMP2AO43633 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP2AO43633 AC003102.2-201ENST00000589195 1469 ntBASIC16.84■□□□□ 0.29
CHMP2AO43633 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP2AO43633 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP2AO43633 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.84■□□□□ 0.29
CHMP2AO43633 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP2AO43633 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP2AO43633 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms