Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.05□□□□□ -0.16
ARHGEF9O43307 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
ARHGEF9O43307 AC087499.6-201ENST00000411576 835 ntBASIC14.05□□□□□ -0.16
ARHGEF9O43307 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.05□□□□□ -0.16
ARHGEF9O43307 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.05□□□□□ -0.16
ARHGEF9O43307 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.05□□□□□ -0.16
ARHGEF9O43307 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.05□□□□□ -0.16
ARHGEF9O43307 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.05□□□□□ -0.16
ARHGEF9O43307 AC017083.2-201ENST00000608069 979 ntBASIC14.05□□□□□ -0.16
ARHGEF9O43307 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 SPDYE12P-201ENST00000618416 771 ntBASIC14.05□□□□□ -0.16
ARHGEF9O43307 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ARHGEF9O43307 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
ARHGEF9O43307 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
ARHGEF9O43307 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 KRT8P44-201ENST00000441609 1350 ntBASIC14.05□□□□□ -0.16
ARHGEF9O43307 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.05□□□□□ -0.16
ARHGEF9O43307 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
ARHGEF9O43307 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.05□□□□□ -0.16
ARHGEF9O43307 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 AC126365.1-201ENST00000578585 1514 ntBASIC14.05□□□□□ -0.16
ARHGEF9O43307 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.05□□□□□ -0.16
ARHGEF9O43307 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF9O43307 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 HIST3H2BA-201ENST00000436555 524 ntBASIC14.04□□□□□ -0.16
ARHGEF9O43307 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 AL589739.1-201ENST00000607720 493 ntBASIC14.04□□□□□ -0.16
ARHGEF9O43307 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.04□□□□□ -0.16
ARHGEF9O43307 MIR6799-201ENST00000620297 69 ntBASIC14.04□□□□□ -0.16
ARHGEF9O43307 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ARHGEF9O43307 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ARHGEF9O43307 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ARHGEF9O43307 CETN4P-206ENST00000642099 2168 ntBASIC14.03□□□□□ -0.16
ARHGEF9O43307 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ARHGEF9O43307 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ARHGEF9O43307 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ARHGEF9O43307 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms