Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC188H7C350 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC188H7C350 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC188H7C350 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC188H7C350 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CCDC188H7C350 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC188H7C350 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC188H7C350 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC188H7C350 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC188H7C350 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.61■□□□□ 0.09
CCDC188H7C350 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC188H7C350 ZNF890P-202ENST00000530367 1156 ntBASIC15.61■□□□□ 0.09
CCDC188H7C350 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC188H7C350 AC069262.1-201ENST00000539058 672 ntBASIC15.61■□□□□ 0.09
CCDC188H7C350 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC188H7C350 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC188H7C350 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC188H7C350 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC188H7C350 MIR6074-201ENST00000612054 107 ntBASIC15.61■□□□□ 0.09
CCDC188H7C350 AL138828.2-201ENST00000615812 383 ntBASIC15.61■□□□□ 0.09
CCDC188H7C350 AL158212.4-201ENST00000624062 1286 ntBASIC15.61■□□□□ 0.09
CCDC188H7C350 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.61■□□□□ 0.09
CCDC188H7C350 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC188H7C350 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC188H7C350 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC188H7C350 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC188H7C350 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.61■□□□□ 0.09
CCDC188H7C350 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC188H7C350 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC188H7C350 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC188H7C350 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC188H7C350 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC188H7C350 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC188H7C350 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC188H7C350 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC188H7C350 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CCDC188H7C350 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC188H7C350 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
CCDC188H7C350 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC188H7C350 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CCDC188H7C350 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 AC105206.1-202ENST00000314927 2368 ntBASIC15.6■□□□□ 0.09
CCDC188H7C350 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CCDC188H7C350 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 NUS1P3-201ENST00000423502 862 ntBASIC15.6■□□□□ 0.09
CCDC188H7C350 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CCDC188H7C350 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.6■□□□□ 0.09
CCDC188H7C350 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC188H7C350 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC188H7C350 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
CCDC188H7C350 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC188H7C350 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC188H7C350 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC188H7C350 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC188H7C350 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.6■□□□□ 0.09
CCDC188H7C350 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC188H7C350 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC188H7C350 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CCDC188H7C350 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CCDC188H7C350 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
CCDC188H7C350 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC188H7C350 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC188H7C350 DRD5P1-201ENST00000456605 1438 ntBASIC15.6■□□□□ 0.09
CCDC188H7C350 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CCDC188H7C350 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CCDC188H7C350 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC188H7C350 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC188H7C350 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CCDC188H7C350 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CCDC188H7C350 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC188H7C350 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CCDC188H7C350 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC188H7C350 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC188H7C350 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC188H7C350 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC188H7C350 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC188H7C350 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC188H7C350 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC188H7C350 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC188H7C350 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC188H7C350 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC188H7C350 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CCDC188H7C350 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CCDC188H7C350 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms