Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC136604.1-202ENST00000425471 771 ntBASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 KRT18P21-201ENST00000515767 1272 ntBASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AL160237.2-201ENST00000556165 472 ntBASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PPP1R26P1-201ENST00000474415 3613 ntBASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TNKS-213ENST00000522110 2900 ntBASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LPP-AS2-201ENST00000605573 2852 ntBASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ARMC10P1-201ENST00000313754 855 ntBASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PER1-211ENST00000581082 4521 ntTSL 5 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC13.09□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.08□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC13.08□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 IYD-208ENST00000500320 2158 ntTSL 2 BASIC13.08□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.08□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms