Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM88BA6NKF7 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 GEMIN8P4-201ENST00000380526 729 ntBASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 DKKL1P1-201ENST00000400550 698 ntBASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 OR8T1P-201ENST00000421347 918 ntBASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 AC104961.1-201ENST00000427605 771 ntBASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 VENTXP3-201ENST00000546480 773 ntBASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 AL512324.3-201ENST00000619383 882 ntBASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 AC020904.3-201ENST00000624199 442 ntBASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 HLF-202ENST00000430986 1385 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM88BA6NKF7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 FAU-201ENST00000279259 461 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 AHCYP3-201ENST00000420053 1279 ntBASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 AC092896.1-201ENST00000465850 380 ntBASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 RPS18P9-201ENST00000482817 460 ntBASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 NEK4P3-201ENST00000604859 544 ntBASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 AC080080.1-201ENST00000625121 2420 ntBASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM88BA6NKF7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 AC092364.2-201ENST00000596710 2692 ntBASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms