Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 AL157407.1-201ENST00000435784 904 ntBASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 AC019193.1-201ENST00000506678 823 ntBASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 PKD1P5-201ENST00000532415 10291 ntBASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB7Q9Y5E2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB7Q9Y5E2 AC008894.3-201ENST00000624324 3103 ntBASIC16.02■□□□□ 0.15
PCDHB7Q9Y5E2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB7Q9Y5E2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.02■□□□□ 0.15
PCDHB7Q9Y5E2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB7Q9Y5E2 KRT8P21-201ENST00000430398 1491 ntBASIC16.02■□□□□ 0.15
PCDHB7Q9Y5E2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB7Q9Y5E2 AC112693.3-201ENST00000624819 1983 ntBASIC16.02■□□□□ 0.15
PCDHB7Q9Y5E2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB7Q9Y5E2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB7Q9Y5E2 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB7Q9Y5E2 TBC1D3J-201ENST00000620719 1426 ntBASIC16.02■□□□□ 0.15
PCDHB7Q9Y5E2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PCDHB7Q9Y5E2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 REXO1L2P-201ENST00000425429 2069 ntBASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 MROH4P-201ENST00000431302 1578 ntBASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 AC253536.4-201ENST00000440539 267 ntBASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 GCOM2-201ENST00000509133 1104 ntBASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 MIR4754-201ENST00000582477 89 ntBASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
PCDHB7Q9Y5E2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 AC144522.1-201ENST00000625111 1658 ntBASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16■□□□□ 0.15
PCDHB7Q9Y5E2 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms