Protein–RNA interactions for Protein: Q9Y4B5

MTCL1, Microtubule cross-linking factor 1, humanhuman

Known RBP Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1Q9Y4B5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTCL1Q9Y4B5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTCL1Q9Y4B5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTCL1Q9Y4B5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
MTCL1Q9Y4B5 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTCL1Q9Y4B5 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTCL1Q9Y4B5 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTCL1Q9Y4B5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.28■□□□□ 0.04
MTCL1Q9Y4B5 PAUPAR-201ENST00000630360 2965 ntBASIC15.28■□□□□ 0.04
MTCL1Q9Y4B5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MTCL1Q9Y4B5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTCL1Q9Y4B5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.28■□□□□ 0.04
MTCL1Q9Y4B5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTCL1Q9Y4B5 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.28■□□□□ 0.04
MTCL1Q9Y4B5 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 HIST2H2BA-201ENST00000412169 381 ntBASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 AC090340.1-201ENST00000620778 4980 ntBASIC15.27■□□□□ 0.04
MTCL1Q9Y4B5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 MIR4649-201ENST00000582839 64 ntBASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MTCL1Q9Y4B5 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 AL136172.1-201ENST00000598590 1394 ntBASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTCL1Q9Y4B5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms