Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 AC020907.1-201ENST00000616460 1350 ntBASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 OR2R1P-201ENST00000441404 914 ntBASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 SCARNA21-201ENST00000517026 139 ntBASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 AC044849.1-201ENST00000519737 1188 ntBASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 AL118558.3-201ENST00000607414 1079 ntBASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 AL022328.3-201ENST00000607943 679 ntBASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 AC090164.2-201ENST00000611487 516 ntBASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC19.85■□□□□ 0.77
NPC1L1Q9UHC9 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 NKAIN1P1-201ENST00000435754 582 ntBASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 MIR4525-201ENST00000580000 75 ntBASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 AL645939.5-201ENST00000606834 243 ntBASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 AC005912.2-201ENST00000619492 2400 ntBASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
NPC1L1Q9UHC9 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 BX284668.4-201ENST00000453917 508 ntBASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 AC021723.1-201ENST00000486306 515 ntBASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 AC022217.1-201ENST00000521069 738 ntBASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 AC005586.2-201ENST00000563946 837 ntBASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 SYT17-208ENST00000568433 812 ntTSL 3 BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 PAM16-211ENST00000575848 518 ntTSL 3 BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 RN7SL219P-201ENST00000582872 296 ntBASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 RN7SL163P-201ENST00000583100 276 ntBASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 DDX5-235ENST00000630471 473 ntTSL 4 BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
NPC1L1Q9UHC9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms