Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC126365.1-201ENST00000578585 1514 ntBASIC13.8□□□□□ -0.2
LRFN1Q9P244 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 MIR663B-201ENST00000408361 115 ntBASIC13.79□□□□□ -0.2
LRFN1Q9P244 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 POM121L10P-201ENST00000436994 1285 ntBASIC13.79□□□□□ -0.2
LRFN1Q9P244 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 HIST2H2BB-201ENST00000449108 381 ntBASIC13.79□□□□□ -0.2
LRFN1Q9P244 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 AC004898.1-201ENST00000451057 766 ntBASIC13.79□□□□□ -0.2
LRFN1Q9P244 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 DBET-201ENST00000630918 3363 ntBASIC13.79□□□□□ -0.2
LRFN1Q9P244 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.79□□□□□ -0.2
LRFN1Q9P244 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRFN1Q9P244 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.78□□□□□ -0.2
LRFN1Q9P244 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.78□□□□□ -0.2
LRFN1Q9P244 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 AP000845.1-201ENST00000581677 2131 ntBASIC13.78□□□□□ -0.2
LRFN1Q9P244 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
LRFN1Q9P244 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.78□□□□□ -0.2
LRFN1Q9P244 BCYRN1-201ENST00000418539 200 ntBASIC13.78□□□□□ -0.2
LRFN1Q9P244 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LRFN1Q9P244 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.78□□□□□ -0.2
LRFN1Q9P244 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.78□□□□□ -0.2
LRFN1Q9P244 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.78□□□□□ -0.2
LRFN1Q9P244 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.78□□□□□ -0.2
LRFN1Q9P244 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.78□□□□□ -0.2
LRFN1Q9P244 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.78□□□□□ -0.2
LRFN1Q9P244 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.78□□□□□ -0.2
LRFN1Q9P244 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.78□□□□□ -0.2
LRFN1Q9P244 AP001002.3-201ENST00000623482 206 ntBASIC13.78□□□□□ -0.2
LRFN1Q9P244 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LRFN1Q9P244 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.78□□□□□ -0.2
LRFN1Q9P244 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 LILRP1-201ENST00000444199 1370 ntBASIC13.78□□□□□ -0.2
LRFN1Q9P244 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 AP000593.2-201ENST00000542775 1433 ntBASIC13.78□□□□□ -0.2
LRFN1Q9P244 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms