Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 AC140878.1-201ENST00000565277 250 ntBASIC14.8□□□□□ -0.04
MKS1Q9NXB0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 BX539320.1-201ENST00000623759 877 ntBASIC14.8□□□□□ -0.04
MKS1Q9NXB0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 SALL4P5-201ENST00000419001 1760 ntBASIC14.8□□□□□ -0.04
MKS1Q9NXB0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 AC211486.1-202ENST00000416371 468 ntBASIC14.79□□□□□ -0.04
MKS1Q9NXB0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 KLF2P3-201ENST00000451977 1087 ntBASIC14.79□□□□□ -0.04
MKS1Q9NXB0 AC009477.1-201ENST00000452936 217 ntBASIC14.79□□□□□ -0.04
MKS1Q9NXB0 AC211476.1-201ENST00000503899 468 ntBASIC14.79□□□□□ -0.04
MKS1Q9NXB0 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 AC027369.6-201ENST00000525520 931 ntBASIC14.79□□□□□ -0.04
MKS1Q9NXB0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 AC010327.4-202ENST00000591484 748 ntBASIC14.79□□□□□ -0.04
MKS1Q9NXB0 AL136172.1-201ENST00000598590 1394 ntBASIC14.79□□□□□ -0.04
MKS1Q9NXB0 AL158211.3-201ENST00000607385 239 ntBASIC14.79□□□□□ -0.04
MKS1Q9NXB0 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 Z92544.3-201ENST00000624747 417 ntBASIC14.79□□□□□ -0.04
MKS1Q9NXB0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MKS1Q9NXB0 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MKS1Q9NXB0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MKS1Q9NXB0 AL161772.1-201ENST00000610494 4412 ntBASIC14.78□□□□□ -0.04
MKS1Q9NXB0 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
MKS1Q9NXB0 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.78□□□□□ -0.04
MKS1Q9NXB0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.78□□□□□ -0.04
MKS1Q9NXB0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms