Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AL360270.3-201ENST00000609118 1348 ntBASIC15.54■□□□□ 0.08
HPS4Q9NQG7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.54■□□□□ 0.08
HPS4Q9NQG7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 AC092506.1-202ENST00000401022 528 ntBASIC15.54■□□□□ 0.08
HPS4Q9NQG7 CYP46A4P-201ENST00000414953 267 ntBASIC15.54■□□□□ 0.08
HPS4Q9NQG7 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.54■□□□□ 0.08
HPS4Q9NQG7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 MIR3619-201ENST00000579667 83 ntBASIC15.54■□□□□ 0.08
HPS4Q9NQG7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 AC138649.2-201ENST00000615886 705 ntBASIC15.54■□□□□ 0.08
HPS4Q9NQG7 AC138627.1-207ENST00000641560 1006 ntBASIC15.54■□□□□ 0.08
HPS4Q9NQG7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 AC022748.3-201ENST00000621828 275 ntBASIC15.53■□□□□ 0.08
HPS4Q9NQG7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 FAM45BP-202ENST00000592932 1624 ntBASIC15.53■□□□□ 0.08
HPS4Q9NQG7 AC105250.1-201ENST00000509378 2057 ntBASIC15.53■□□□□ 0.08
HPS4Q9NQG7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.53■□□□□ 0.08
HPS4Q9NQG7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 SPTLC1P5-201ENST00000450718 252 ntBASIC15.52■□□□□ 0.08
HPS4Q9NQG7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 MIR4683-201ENST00000579659 81 ntBASIC15.52■□□□□ 0.08
HPS4Q9NQG7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.52■□□□□ 0.08
HPS4Q9NQG7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms