Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 U82695.1-201ENST00000635752 1889 ntBASIC17.95■□□□□ 0.46
RTN4Q9NQC3 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 CCDC32-202ENST00000416810 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 AL157702.2-201ENST00000428292 1223 ntTSL 3 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 FAM185BP-201ENST00000443595 716 ntBASIC17.95■□□□□ 0.46
RTN4Q9NQC3 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 PRELID1P1-202ENST00000567272 903 ntBASIC17.95■□□□□ 0.46
RTN4Q9NQC3 MIR4515-201ENST00000584082 81 ntBASIC17.95■□□□□ 0.46
RTN4Q9NQC3 AC008735.5-201ENST00000623544 497 ntBASIC17.95■□□□□ 0.46
RTN4Q9NQC3 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 AC022384.1-202ENST00000450534 2831 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 RNU1-129P-201ENST00000384064 167 ntBASIC17.94■□□□□ 0.46
RTN4Q9NQC3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 RFESDP1-201ENST00000422350 461 ntBASIC17.94■□□□□ 0.46
RTN4Q9NQC3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 RNPS1P1-201ENST00000507437 918 ntBASIC17.94■□□□□ 0.46
RTN4Q9NQC3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 U1.21-201ENST00000580816 167 ntBASIC17.94■□□□□ 0.46
RTN4Q9NQC3 CLEC4GP1-201ENST00000596555 870 ntBASIC17.94■□□□□ 0.46
RTN4Q9NQC3 AL356488.2-201ENST00000602755 427 ntBASIC17.94■□□□□ 0.46
RTN4Q9NQC3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 AL583810.2-201ENST00000556430 3254 ntBASIC17.94■□□□□ 0.46
RTN4Q9NQC3 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTN4Q9NQC3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms