Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 AC134915.1-201ENST00000426461 574 ntBASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 AC093214.1-201ENST00000511688 1107 ntBASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 AC120045.2-201ENST00000567334 178 ntBASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 KRT8P14-201ENST00000414254 1442 ntBASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRTM1Q9HBL6 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 AC152010.1-201ENST00000415779 2006 ntBASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 GNAQP1-201ENST00000444815 1067 ntBASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 AC104596.2-201ENST00000512793 793 ntBASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 SPDYE22P-201ENST00000582158 798 ntBASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.46□□□□□ -0.09
LRTM1Q9HBL6 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LRTM1Q9HBL6 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRTM1Q9HBL6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
LRTM1Q9HBL6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.46□□□□□ -0.1
LRTM1Q9HBL6 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRTM1Q9HBL6 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRTM1Q9HBL6 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.46□□□□□ -0.1
LRTM1Q9HBL6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
LRTM1Q9HBL6 AC136759.1-202ENST00000530858 2194 ntBASIC14.46□□□□□ -0.1
LRTM1Q9HBL6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms