Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 AC104989.1-201ENST00000519711 778 ntBASIC10.54□□□□□ -0.72
UPK3BQ9BT76 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 AC079316.1-201ENST00000548397 411 ntBASIC10.54□□□□□ -0.72
UPK3BQ9BT76 AC010491.1-201ENST00000563101 2797 ntBASIC10.54□□□□□ -0.72
UPK3BQ9BT76 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 AL008721.1-201ENST00000609964 604 ntBASIC10.54□□□□□ -0.72
UPK3BQ9BT76 AC133552.6-201ENST00000613406 534 ntBASIC10.54□□□□□ -0.72
UPK3BQ9BT76 AL354718.3-201ENST00000616414 581 ntBASIC10.54□□□□□ -0.72
UPK3BQ9BT76 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 CR382287.1-201ENST00000623954 586 ntBASIC10.54□□□□□ -0.72
UPK3BQ9BT76 AL603764.1-201ENST00000636452 321 ntBASIC10.54□□□□□ -0.72
UPK3BQ9BT76 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 USE1-206ENST00000595101 1776 ntTSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 AC005840.4-201ENST00000541242 2494 ntBASIC10.53□□□□□ -0.72
UPK3BQ9BT76 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 CTBP1-AS2-206ENST00000581398 5652 ntBASIC10.53□□□□□ -0.72
UPK3BQ9BT76 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 ARHGAP23P1-201ENST00000562773 1937 ntBASIC10.53□□□□□ -0.72
UPK3BQ9BT76 DKFZP434H168-201ENST00000567381 1905 ntBASIC10.53□□□□□ -0.72
UPK3BQ9BT76 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 AC107918.4-201ENST00000641966 3141 ntBASIC10.53□□□□□ -0.72
UPK3BQ9BT76 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 GZMB-202ENST00000382540 816 ntTSL 5 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 MIR1909-201ENST00000411312 80 ntBASIC10.53□□□□□ -0.72
UPK3BQ9BT76 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC10.53□□□□□ -0.72
UPK3BQ9BT76 PRSS30P-206ENST00000641773 873 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms