Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 PGAM5P1-201ENST00000518923 814 ntBASIC14.65□□□□□ -0.06
EBF4Q9BQW3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.65□□□□□ -0.06
EBF4Q9BQW3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.65□□□□□ -0.07
EBF4Q9BQW3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 AL356585.2-201ENST00000625078 2396 ntBASIC14.64□□□□□ -0.07
EBF4Q9BQW3 AC015818.8-201ENST00000587907 1519 ntBASIC14.64□□□□□ -0.07
EBF4Q9BQW3 RN7SL832P-201ENST00000607781 1756 ntBASIC14.64□□□□□ -0.07
EBF4Q9BQW3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
EBF4Q9BQW3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms