Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 MIR4754-201ENST00000582477 89 ntBASIC13.18□□□□□ -0.3
PCNX1Q96RV3 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCNX1Q96RV3 CAP2P1-201ENST00000557743 1390 ntBASIC13.18□□□□□ -0.3
PCNX1Q96RV3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 TBC1D3J-201ENST00000620719 1426 ntBASIC13.17□□□□□ -0.3
PCNX1Q96RV3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 RTN3P1-201ENST00000536295 711 ntBASIC13.17□□□□□ -0.3
PCNX1Q96RV3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 AL132994.2-201ENST00000603120 687 ntBASIC13.17□□□□□ -0.3
PCNX1Q96RV3 MEG3_2.1-201ENST00000611456 105 ntBASIC13.17□□□□□ -0.3
PCNX1Q96RV3 AL162426.1-201ENST00000624141 743 ntBASIC13.17□□□□□ -0.3
PCNX1Q96RV3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 PRORSD1P-202ENST00000563365 2154 ntBASIC13.17□□□□□ -0.3
PCNX1Q96RV3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 AC005740.2-201ENST00000511085 419 ntBASIC13.17□□□□□ -0.3
PCNX1Q96RV3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 RPL17P45-201ENST00000586289 509 ntBASIC13.17□□□□□ -0.3
PCNX1Q96RV3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCNX1Q96RV3 AC023090.2-201ENST00000625182 2110 ntBASIC13.16□□□□□ -0.3
PCNX1Q96RV3 E2F3P2-201ENST00000447755 1422 ntBASIC13.16□□□□□ -0.3
PCNX1Q96RV3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PCNX1Q96RV3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.16□□□□□ -0.3
PCNX1Q96RV3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCNX1Q96RV3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCNX1Q96RV3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCNX1Q96RV3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
PCNX1Q96RV3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCNX1Q96RV3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PCNX1Q96RV3 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
PCNX1Q96RV3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCNX1Q96RV3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PCNX1Q96RV3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms