Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
GAFA1Q96PS6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.46□□□□□ -0.42
GAFA1Q96PS6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
GAFA1Q96PS6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
GAFA1Q96PS6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.46□□□□□ -0.42
GAFA1Q96PS6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
GAFA1Q96PS6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
GAFA1Q96PS6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.46□□□□□ -0.42
GAFA1Q96PS6 AC020910.5-201ENST00000623668 1865 ntBASIC12.46□□□□□ -0.42
GAFA1Q96PS6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GAFA1Q96PS6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
GAFA1Q96PS6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GAFA1Q96PS6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GAFA1Q96PS6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
GAFA1Q96PS6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GAFA1Q96PS6 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.46□□□□□ -0.42
GAFA1Q96PS6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 AP000593.2-201ENST00000542775 1433 ntBASIC12.45□□□□□ -0.42
GAFA1Q96PS6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 AC131206.1-201ENST00000538078 1211 ntBASIC12.45□□□□□ -0.42
GAFA1Q96PS6 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 MIR6775-201ENST00000617557 69 ntBASIC12.45□□□□□ -0.42
GAFA1Q96PS6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 AL161772.1-201ENST00000610494 4412 ntBASIC12.45□□□□□ -0.42
GAFA1Q96PS6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
GAFA1Q96PS6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 AHCYP2-201ENST00000430630 1300 ntBASIC12.44□□□□□ -0.42
GAFA1Q96PS6 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.44□□□□□ -0.42
GAFA1Q96PS6 AC026954.1-201ENST00000429771 1293 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms