Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC002472.3-201ENST00000640124 621 ntBASIC16.14■□□□□ 0.17
LRCH3Q96II8 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 MIR566-201ENST00000385187 94 ntBASIC16.13■□□□□ 0.17
LRCH3Q96II8 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 AC078875.1-201ENST00000431907 724 ntBASIC16.13■□□□□ 0.17
LRCH3Q96II8 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 MESTP3-201ENST00000503460 968 ntBASIC16.13■□□□□ 0.17
LRCH3Q96II8 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 AC007326.1-201ENST00000604539 458 ntBASIC16.13■□□□□ 0.17
LRCH3Q96II8 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 AL034417.3-201ENST00000641100 1043 ntBASIC16.13■□□□□ 0.17
LRCH3Q96II8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.13■□□□□ 0.17
LRCH3Q96II8 AL008718.2-201ENST00000609206 1313 ntBASIC16.13■□□□□ 0.17
LRCH3Q96II8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRCH3Q96II8 MTHFR-217ENST00000641820 1569 ntBASIC16.13■□□□□ 0.17
LRCH3Q96II8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.13■□□□□ 0.17
LRCH3Q96II8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LRCH3Q96II8 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.12■□□□□ 0.17
LRCH3Q96II8 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.12■□□□□ 0.17
LRCH3Q96II8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH3Q96II8 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH3Q96II8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
LRCH3Q96II8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH3Q96II8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH3Q96II8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH3Q96II8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.12■□□□□ 0.17
LRCH3Q96II8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH3Q96II8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH3Q96II8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH3Q96II8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH3Q96II8 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.12■□□□□ 0.17
LRCH3Q96II8 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LRCH3Q96II8 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH3Q96II8 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LRCH3Q96II8 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH3Q96II8 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.12■□□□□ 0.17
LRCH3Q96II8 HCG24-202ENST00000414398 717 ntTSL 3 BASIC16.12■□□□□ 0.17
LRCH3Q96II8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.12■□□□□ 0.17
LRCH3Q96II8 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC16.12■□□□□ 0.17
LRCH3Q96II8 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.12■□□□□ 0.17
LRCH3Q96II8 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRCH3Q96II8 ORAOV1P1-201ENST00000503108 395 ntBASIC16.12■□□□□ 0.17
LRCH3Q96II8 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC16.12■□□□□ 0.17
LRCH3Q96II8 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
LRCH3Q96II8 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms