Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 AC012617.1-204ENST00000586340 2305 ntBASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 AC068760.1-201ENST00000493579 1953 ntBASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 AC018665.1-201ENST00000622927 1362 ntBASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 AL135744.1-201ENST00000565098 629 ntBASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 AC099522.2-201ENST00000607001 744 ntBASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
CHMP6Q96FZ7 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 FAM220BP-201ENST00000377689 816 ntBASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 TFAMP1-201ENST00000412727 736 ntBASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 AL355306.1-201ENST00000415580 579 ntBASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 SPDYE11-202ENST00000450699 704 ntBASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 IGHV3-62-201ENST00000520057 340 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms