Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 RN7SKP175-201ENST00000408472 289 ntBASIC13.18□□□□□ -0.3
TMEM54Q969K7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 FAM8A4P-201ENST00000435433 1213 ntBASIC13.18□□□□□ -0.3
TMEM54Q969K7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 AC078819.1-201ENST00000547454 765 ntBASIC13.18□□□□□ -0.3
TMEM54Q969K7 AC012085.1-201ENST00000548270 765 ntBASIC13.18□□□□□ -0.3
TMEM54Q969K7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 BX088702.1-201ENST00000610784 235 ntBASIC13.18□□□□□ -0.3
TMEM54Q969K7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM54Q969K7 AC007686.3-201ENST00000619017 3487 ntBASIC13.18□□□□□ -0.3
TMEM54Q969K7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM54Q969K7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 AP001267.2-201ENST00000532619 2086 ntBASIC13.17□□□□□ -0.3
TMEM54Q969K7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 AC006001.1-201ENST00000325130 474 ntBASIC13.17□□□□□ -0.3
TMEM54Q969K7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 ALG3P1-201ENST00000508806 1114 ntBASIC13.17□□□□□ -0.3
TMEM54Q969K7 AP003171.2-201ENST00000528208 925 ntBASIC13.17□□□□□ -0.3
TMEM54Q969K7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 AC106886.1-201ENST00000568660 600 ntBASIC13.17□□□□□ -0.3
TMEM54Q969K7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 AC138951.2-201ENST00000623455 1161 ntBASIC13.17□□□□□ -0.3
TMEM54Q969K7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM54Q969K7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TMEM54Q969K7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms