Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP6NLQ92738 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
USP6NLQ92738 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP6NLQ92738 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.87■□□□□ 0.29
USP6NLQ92738 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP6NLQ92738 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
USP6NLQ92738 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP6NLQ92738 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP6NLQ92738 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP6NLQ92738 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP6NLQ92738 RPS9P1-201ENST00000419943 583 ntBASIC16.87■□□□□ 0.29
USP6NLQ92738 AL645933.1-201ENST00000440087 609 ntBASIC16.87■□□□□ 0.29
USP6NLQ92738 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.87■□□□□ 0.29
USP6NLQ92738 AC006122.1-201ENST00000493323 440 ntBASIC16.87■□□□□ 0.29
USP6NLQ92738 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.87■□□□□ 0.29
USP6NLQ92738 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.87■□□□□ 0.29
USP6NLQ92738 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
USP6NLQ92738 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
USP6NLQ92738 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
USP6NLQ92738 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP6NLQ92738 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP6NLQ92738 AL359258.3-201ENST00000622910 2331 ntBASIC16.87■□□□□ 0.29
USP6NLQ92738 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP6NLQ92738 AC144522.1-201ENST00000625111 1658 ntBASIC16.87■□□□□ 0.29
USP6NLQ92738 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.87■□□□□ 0.29
USP6NLQ92738 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
USP6NLQ92738 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
USP6NLQ92738 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP6NLQ92738 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP6NLQ92738 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP6NLQ92738 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
USP6NLQ92738 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.86■□□□□ 0.29
USP6NLQ92738 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP6NLQ92738 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP6NLQ92738 CYP4F23P-201ENST00000593402 1579 ntBASIC16.86■□□□□ 0.29
USP6NLQ92738 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP6NLQ92738 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.86■□□□□ 0.29
USP6NLQ92738 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.86■□□□□ 0.29
USP6NLQ92738 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP6NLQ92738 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.86■□□□□ 0.29
USP6NLQ92738 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP6NLQ92738 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP6NLQ92738 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP6NLQ92738 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.86■□□□□ 0.29
USP6NLQ92738 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.86■□□□□ 0.29
USP6NLQ92738 TLE1P1-201ENST00000422965 589 ntBASIC16.86■□□□□ 0.29
USP6NLQ92738 RPL8P2-201ENST00000430538 502 ntBASIC16.86■□□□□ 0.29
USP6NLQ92738 RPL7P35-201ENST00000446943 740 ntBASIC16.86■□□□□ 0.29
USP6NLQ92738 CTBP2P4-201ENST00000513884 920 ntBASIC16.86■□□□□ 0.29
USP6NLQ92738 AP002803.1-201ENST00000528836 498 ntBASIC16.86■□□□□ 0.29
USP6NLQ92738 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
USP6NLQ92738 AL031713.1-201ENST00000564813 661 ntBASIC16.86■□□□□ 0.29
USP6NLQ92738 PHBP15-201ENST00000574228 665 ntBASIC16.86■□□□□ 0.29
USP6NLQ92738 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.86■□□□□ 0.29
USP6NLQ92738 MIR4649-201ENST00000582839 64 ntBASIC16.86■□□□□ 0.29
USP6NLQ92738 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.86■□□□□ 0.29
USP6NLQ92738 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.86■□□□□ 0.29
USP6NLQ92738 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.86■□□□□ 0.29
USP6NLQ92738 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.86■□□□□ 0.29
USP6NLQ92738 MIR6769A-201ENST00000617340 73 ntBASIC16.86■□□□□ 0.29
USP6NLQ92738 AC027601.3-201ENST00000622907 509 ntBASIC16.86■□□□□ 0.29
USP6NLQ92738 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP6NLQ92738 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
USP6NLQ92738 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.86■□□□□ 0.29
USP6NLQ92738 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.86■□□□□ 0.29
USP6NLQ92738 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP6NLQ92738 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP6NLQ92738 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.85■□□□□ 0.29
USP6NLQ92738 AC103702.1-201ENST00000548801 2630 ntBASIC16.85■□□□□ 0.29
USP6NLQ92738 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
USP6NLQ92738 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.85■□□□□ 0.29
USP6NLQ92738 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP6NLQ92738 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP6NLQ92738 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP6NLQ92738 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP6NLQ92738 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP6NLQ92738 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.85■□□□□ 0.29
USP6NLQ92738 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP6NLQ92738 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP6NLQ92738 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP6NLQ92738 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP6NLQ92738 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
USP6NLQ92738 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP6NLQ92738 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.85■□□□□ 0.29
USP6NLQ92738 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP6NLQ92738 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.85■□□□□ 0.29
USP6NLQ92738 KRT18P66-201ENST00000452970 1269 ntBASIC16.85■□□□□ 0.29
USP6NLQ92738 NDUFS6P1-201ENST00000485187 316 ntBASIC16.85■□□□□ 0.29
USP6NLQ92738 AC008723.1-201ENST00000506922 207 ntBASIC16.85■□□□□ 0.29
USP6NLQ92738 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.85■□□□□ 0.29
USP6NLQ92738 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.85■□□□□ 0.29
USP6NLQ92738 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP6NLQ92738 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
USP6NLQ92738 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.85■□□□□ 0.29
USP6NLQ92738 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.85■□□□□ 0.29
USP6NLQ92738 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
USP6NLQ92738 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.85■□□□□ 0.29
USP6NLQ92738 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.85■□□□□ 0.29
USP6NLQ92738 AP005117.1-202ENST00000581724 1908 ntBASIC16.85■□□□□ 0.29
USP6NLQ92738 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms