Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 LINC00552-201ENST00000625151 2579 ntBASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 HLA-V-201ENST00000429037 534 ntBASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 ATP5G2P4-201ENST00000442175 420 ntBASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 AC023310.1-201ENST00000554836 735 ntBASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ZIC4Q8N9L1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 AC232323.1-201ENST00000540724 2099 ntBASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 CNN2P10-201ENST00000443067 918 ntBASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 CHMP1AP1-201ENST00000445563 662 ntBASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 AC133552.6-201ENST00000613406 534 ntBASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 AC007686.3-201ENST00000619017 3487 ntBASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZIC4Q8N9L1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 AC113367.3-201ENST00000508316 1912 ntBASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms