Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 MIR770-201ENST00000390219 98 ntBASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 FAM207CP-201ENST00000443486 507 ntBASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 SERBP1P5-201ENST00000510079 1181 ntBASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 AC123567.1-201ENST00000548294 1261 ntBASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 SPDYE22P-201ENST00000582158 798 ntBASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LSMEM1Q8N8F7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 AC022616.1-201ENST00000518688 554 ntBASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 ENPP7P5-201ENST00000541031 1031 ntBASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 AL359711.2-201ENST00000563105 872 ntBASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LSMEM1Q8N8F7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms