Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 AC007041.1-201ENST00000438989 1155 ntBASIC15.25■□□□□ 0.03
PACS2Q86VP3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 RN7SL589P-201ENST00000481268 310 ntBASIC15.25■□□□□ 0.03
PACS2Q86VP3 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 RARRES2P8-201ENST00000566335 367 ntBASIC15.25■□□□□ 0.03
PACS2Q86VP3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.25■□□□□ 0.03
PACS2Q86VP3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 AC008147.4-201ENST00000617570 1204 ntBASIC15.25■□□□□ 0.03
PACS2Q86VP3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 AC016397.2-201ENST00000624848 1985 ntBASIC15.25■□□□□ 0.03
PACS2Q86VP3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.25■□□□□ 0.03
PACS2Q86VP3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PACS2Q86VP3 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 CASC19-229ENST00000641418 1373 ntBASIC15.24■□□□□ 0.03
PACS2Q86VP3 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.24■□□□□ 0.03
PACS2Q86VP3 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 AKAP8P1-201ENST00000434743 1349 ntBASIC15.24■□□□□ 0.03
PACS2Q86VP3 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 AC004899.2-201ENST00000622993 3860 ntBASIC15.24■□□□□ 0.03
PACS2Q86VP3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 AL355306.1-201ENST00000415580 579 ntBASIC15.24■□□□□ 0.03
PACS2Q86VP3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 DNAJB3-202ENST00000449667 1266 ntBASIC15.24■□□□□ 0.03
PACS2Q86VP3 SPDYE11-202ENST00000450699 704 ntBASIC15.24■□□□□ 0.03
PACS2Q86VP3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 SPDYE9P-201ENST00000570642 692 ntBASIC15.24■□□□□ 0.03
PACS2Q86VP3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 AL596442.2-201ENST00000610240 980 ntBASIC15.24■□□□□ 0.03
PACS2Q86VP3 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 SPDYE10P-202ENST00000612005 668 ntBASIC15.24■□□□□ 0.03
PACS2Q86VP3 SPDYE8P-202ENST00000612377 668 ntBASIC15.24■□□□□ 0.03
PACS2Q86VP3 AC073575.2-201ENST00000614212 627 ntBASIC15.24■□□□□ 0.03
PACS2Q86VP3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms