Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.88■□□□□ 0.77
KRT28Q7Z3Y7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT28Q7Z3Y7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.88■□□□□ 0.77
KRT28Q7Z3Y7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT28Q7Z3Y7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT28Q7Z3Y7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT28Q7Z3Y7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 AP002353.1-201ENST00000528257 1599 ntBASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 FTX-216ENST00000638985 1367 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 AC140113.1-201ENST00000603467 169 ntBASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT28Q7Z3Y7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 CSNK1G2P1-201ENST00000442675 955 ntBASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 FAM86KP-201ENST00000509817 987 ntBASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 IGHVIII-5-2-201ENST00000522505 261 ntBASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 RN7SL357P-201ENST00000581065 298 ntBASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 AC012073.1-201ENST00000606114 1108 ntBASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 AC002044.2-201ENST00000624910 970 ntBASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 AC021305.1-201ENST00000520656 1514 ntBASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
KRT28Q7Z3Y7 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 MIR645-201ENST00000385283 94 ntBASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 FAM86B3P-203ENST00000523992 854 ntBASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms