Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.64□□□□□ -0.23
SHFQ7M4L6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SHFQ7M4L6 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.64□□□□□ -0.23
SHFQ7M4L6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.64□□□□□ -0.23
SHFQ7M4L6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.64□□□□□ -0.23
SHFQ7M4L6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.64□□□□□ -0.23
SHFQ7M4L6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.64□□□□□ -0.23
SHFQ7M4L6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.64□□□□□ -0.23
SHFQ7M4L6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.64□□□□□ -0.23
SHFQ7M4L6 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SHFQ7M4L6 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.64□□□□□ -0.23
SHFQ7M4L6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.63□□□□□ -0.23
SHFQ7M4L6 CNN2P2-201ENST00000443536 909 ntBASIC13.63□□□□□ -0.23
SHFQ7M4L6 CNN2P3-201ENST00000450201 906 ntBASIC13.63□□□□□ -0.23
SHFQ7M4L6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.63□□□□□ -0.23
SHFQ7M4L6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 HLA-J-203ENST00000494367 1087 ntBASIC13.63□□□□□ -0.23
SHFQ7M4L6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 AC051619.7-201ENST00000568314 623 ntBASIC13.63□□□□□ -0.23
SHFQ7M4L6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 TEX28P1-201ENST00000613479 1221 ntBASIC13.63□□□□□ -0.23
SHFQ7M4L6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 TEX28P2-201ENST00000617764 1221 ntBASIC13.63□□□□□ -0.23
SHFQ7M4L6 AL136317.3-201ENST00000618497 906 ntBASIC13.63□□□□□ -0.23
SHFQ7M4L6 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.63□□□□□ -0.23
SHFQ7M4L6 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 AC055811.4-201ENST00000624039 1754 ntBASIC13.63□□□□□ -0.23
SHFQ7M4L6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHFQ7M4L6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms