Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 CSF2RBP1-201ENST00000447905 391 ntBASIC14.41□□□□□ -0.1
RNF44Q7L0R7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 AL008721.1-201ENST00000609964 604 ntBASIC14.41□□□□□ -0.1
RNF44Q7L0R7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.41□□□□□ -0.1
RNF44Q7L0R7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RNF44Q7L0R7 AL354989.2-201ENST00000435838 1540 ntBASIC14.41□□□□□ -0.1
RNF44Q7L0R7 AHCYP2-201ENST00000430630 1300 ntBASIC14.41□□□□□ -0.1
RNF44Q7L0R7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 FTLP10-202ENST00000505798 471 ntBASIC14.4□□□□□ -0.1
RNF44Q7L0R7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 AC023310.1-201ENST00000554836 735 ntBASIC14.4□□□□□ -0.1
RNF44Q7L0R7 AC106820.3-201ENST00000561653 397 ntBASIC14.4□□□□□ -0.1
RNF44Q7L0R7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 AC023090.2-201ENST00000625182 2110 ntBASIC14.4□□□□□ -0.1
RNF44Q7L0R7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
RNF44Q7L0R7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF44Q7L0R7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF44Q7L0R7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF44Q7L0R7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF44Q7L0R7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RNF44Q7L0R7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF44Q7L0R7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF44Q7L0R7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RNF44Q7L0R7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RNF44Q7L0R7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF44Q7L0R7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF44Q7L0R7 TCAF2P1-201ENST00000291129 2421 ntBASIC14.39□□□□□ -0.11
RNF44Q7L0R7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF44Q7L0R7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF44Q7L0R7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF44Q7L0R7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms