Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC96Q2M329 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC96Q2M329 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC96Q2M329 FAM8A2P-201ENST00000528813 1142 ntBASIC17.49■□□□□ 0.39
CCDC96Q2M329 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.49■□□□□ 0.39
CCDC96Q2M329 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC96Q2M329 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC96Q2M329 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.49■□□□□ 0.39
CCDC96Q2M329 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC96Q2M329 AC005695.3-201ENST00000614522 232 ntBASIC17.49■□□□□ 0.39
CCDC96Q2M329 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC96Q2M329 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC96Q2M329 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC96Q2M329 AC091951.1-201ENST00000512854 2465 ntBASIC17.49■□□□□ 0.39
CCDC96Q2M329 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC96Q2M329 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC96Q2M329 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC96Q2M329 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCDC96Q2M329 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
CCDC96Q2M329 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC96Q2M329 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC96Q2M329 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC96Q2M329 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC96Q2M329 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC96Q2M329 AC011840.2-201ENST00000563063 1520 ntBASIC17.48■□□□□ 0.39
CCDC96Q2M329 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC96Q2M329 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC96Q2M329 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC96Q2M329 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC96Q2M329 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.48■□□□□ 0.39
CCDC96Q2M329 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC96Q2M329 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC96Q2M329 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC96Q2M329 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC96Q2M329 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCDC96Q2M329 AC079178.1-201ENST00000420915 656 ntBASIC17.48■□□□□ 0.39
CCDC96Q2M329 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC96Q2M329 HIST2H2BB-201ENST00000449108 381 ntBASIC17.48■□□□□ 0.39
CCDC96Q2M329 AC099548.2-209ENST00000480264 625 ntBASIC17.48■□□□□ 0.39
CCDC96Q2M329 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC96Q2M329 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.48■□□□□ 0.39
CCDC96Q2M329 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC96Q2M329 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.48■□□□□ 0.39
CCDC96Q2M329 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.48■□□□□ 0.39
CCDC96Q2M329 AL118558.3-201ENST00000607414 1079 ntBASIC17.48■□□□□ 0.39
CCDC96Q2M329 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC96Q2M329 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC96Q2M329 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCDC96Q2M329 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC96Q2M329 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC96Q2M329 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC96Q2M329 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC96Q2M329 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC96Q2M329 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC96Q2M329 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC96Q2M329 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CCDC96Q2M329 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 AL365209.1-201ENST00000624418 6473 ntBASIC17.47■□□□□ 0.39
CCDC96Q2M329 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 AC104306.2-201ENST00000451877 341 ntBASIC17.47■□□□□ 0.39
CCDC96Q2M329 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 MIR4683-201ENST00000579659 81 ntBASIC17.47■□□□□ 0.39
CCDC96Q2M329 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 AL096828.3-201ENST00000615354 462 ntBASIC17.47■□□□□ 0.39
CCDC96Q2M329 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 INE2-201ENST00000630399 1874 ntBASIC17.47■□□□□ 0.39
CCDC96Q2M329 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 MYO15B-237ENST00000642007 4893 ntBASIC17.47■□□□□ 0.39
CCDC96Q2M329 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC96Q2M329 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC96Q2M329 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC96Q2M329 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms