Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
EFNB3Q15768 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.79□□□□□ -0.36
EFNB3Q15768 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 GPAA1P2-201ENST00000417923 928 ntBASIC12.79□□□□□ -0.36
EFNB3Q15768 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
EFNB3Q15768 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.79□□□□□ -0.36
EFNB3Q15768 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.79□□□□□ -0.36
EFNB3Q15768 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.79□□□□□ -0.36
EFNB3Q15768 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.79□□□□□ -0.36
EFNB3Q15768 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.79□□□□□ -0.36
EFNB3Q15768 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 AC244093.1-201ENST00000610837 814 ntBASIC12.79□□□□□ -0.36
EFNB3Q15768 AP001002.3-201ENST00000623482 206 ntBASIC12.79□□□□□ -0.36
EFNB3Q15768 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.79□□□□□ -0.36
EFNB3Q15768 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
EFNB3Q15768 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
EFNB3Q15768 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.79□□□□□ -0.36
EFNB3Q15768 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.79□□□□□ -0.36
EFNB3Q15768 AL138725.1-201ENST00000407347 1314 ntBASIC12.79□□□□□ -0.36
EFNB3Q15768 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.79□□□□□ -0.36
EFNB3Q15768 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.79□□□□□ -0.36
EFNB3Q15768 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
EFNB3Q15768 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.79□□□□□ -0.36
EFNB3Q15768 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
EFNB3Q15768 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
EFNB3Q15768 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
EFNB3Q15768 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
EFNB3Q15768 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.78□□□□□ -0.36
EFNB3Q15768 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.78□□□□□ -0.36
EFNB3Q15768 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
EFNB3Q15768 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
EFNB3Q15768 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
EFNB3Q15768 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
EFNB3Q15768 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.78□□□□□ -0.36
EFNB3Q15768 AL354877.1-201ENST00000424412 413 ntBASIC12.78□□□□□ -0.36
EFNB3Q15768 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.78□□□□□ -0.36
EFNB3Q15768 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.78□□□□□ -0.36
EFNB3Q15768 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.78□□□□□ -0.36
EFNB3Q15768 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
EFNB3Q15768 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.78□□□□□ -0.36
EFNB3Q15768 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.78□□□□□ -0.36
EFNB3Q15768 AC002472.3-201ENST00000640124 621 ntBASIC12.78□□□□□ -0.36
EFNB3Q15768 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.78□□□□□ -0.36
EFNB3Q15768 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.78□□□□□ -0.36
EFNB3Q15768 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.78□□□□□ -0.36
EFNB3Q15768 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 AL359258.3-201ENST00000622910 2331 ntBASIC12.78□□□□□ -0.36
EFNB3Q15768 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.78□□□□□ -0.36
EFNB3Q15768 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB3Q15768 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
EFNB3Q15768 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
EFNB3Q15768 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.77□□□□□ -0.36
EFNB3Q15768 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.77□□□□□ -0.36
EFNB3Q15768 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
EFNB3Q15768 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
EFNB3Q15768 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
EFNB3Q15768 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
EFNB3Q15768 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.77□□□□□ -0.36
EFNB3Q15768 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
EFNB3Q15768 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
EFNB3Q15768 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
EFNB3Q15768 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.77□□□□□ -0.36
EFNB3Q15768 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
EFNB3Q15768 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms