Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC092135.3-201ENST00000624151 1846 ntBASIC19.42■□□□□ 0.7
COL16A1Q07092 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
COL16A1Q07092 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC19.41■□□□□ 0.7
COL16A1Q07092 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL16A1Q07092 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL16A1Q07092 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC19.41■□□□□ 0.7
COL16A1Q07092 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC19.41■□□□□ 0.7
COL16A1Q07092 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC19.41■□□□□ 0.7
COL16A1Q07092 SNRPCP15-201ENST00000424055 192 ntBASIC19.41■□□□□ 0.7
COL16A1Q07092 SLC25A15P1-201ENST00000456738 342 ntBASIC19.41■□□□□ 0.7
COL16A1Q07092 SLC25A15P3-201ENST00000505530 290 ntBASIC19.41■□□□□ 0.7
COL16A1Q07092 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC19.41■□□□□ 0.7
COL16A1Q07092 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
COL16A1Q07092 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC19.41■□□□□ 0.7
COL16A1Q07092 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC19.41■□□□□ 0.7
COL16A1Q07092 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC19.41■□□□□ 0.7
COL16A1Q07092 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL16A1Q07092 RN7SL524P-201ENST00000581152 300 ntBASIC19.41■□□□□ 0.7
COL16A1Q07092 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC19.41■□□□□ 0.7
COL16A1Q07092 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL16A1Q07092 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.41■□□□□ 0.7
COL16A1Q07092 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.41■□□□□ 0.7
COL16A1Q07092 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL16A1Q07092 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL16A1Q07092 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL16A1Q07092 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL16A1Q07092 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL16A1Q07092 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL16A1Q07092 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.41■□□□□ 0.7
COL16A1Q07092 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.41■□□□□ 0.7
COL16A1Q07092 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL16A1Q07092 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC19.4■□□□□ 0.7
COL16A1Q07092 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
COL16A1Q07092 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC19.4■□□□□ 0.7
COL16A1Q07092 FAM226B-201ENST00000602508 1490 ntBASIC19.4■□□□□ 0.7
COL16A1Q07092 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
COL16A1Q07092 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL16A1Q07092 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL16A1Q07092 PDXDC2P-206ENST00000534700 1315 ntBASIC19.4■□□□□ 0.7
COL16A1Q07092 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
COL16A1Q07092 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL16A1Q07092 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC19.4■□□□□ 0.7
COL16A1Q07092 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
COL16A1Q07092 POLR2LP1-206ENST00000444785 187 ntBASIC19.4■□□□□ 0.7
COL16A1Q07092 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.4■□□□□ 0.7
COL16A1Q07092 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
COL16A1Q07092 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL16A1Q07092 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL16A1Q07092 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL16A1Q07092 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL16A1Q07092 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL16A1Q07092 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.4■□□□□ 0.7
COL16A1Q07092 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL16A1Q07092 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC19.4■□□□□ 0.7
COL16A1Q07092 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL16A1Q07092 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC19.4■□□□□ 0.7
COL16A1Q07092 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC19.4■□□□□ 0.7
COL16A1Q07092 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC19.4■□□□□ 0.7
COL16A1Q07092 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
COL16A1Q07092 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.4■□□□□ 0.7
COL16A1Q07092 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
COL16A1Q07092 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
COL16A1Q07092 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
COL16A1Q07092 AL139384.1-201ENST00000612143 3047 ntBASIC19.39■□□□□ 0.69
COL16A1Q07092 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC19.39■□□□□ 0.69
COL16A1Q07092 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.39■□□□□ 0.69
COL16A1Q07092 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC19.39■□□□□ 0.69
COL16A1Q07092 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC19.39■□□□□ 0.69
COL16A1Q07092 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC19.39■□□□□ 0.69
COL16A1Q07092 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COL16A1Q07092 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
COL16A1Q07092 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC19.39■□□□□ 0.69
COL16A1Q07092 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC19.39■□□□□ 0.69
COL16A1Q07092 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC19.39■□□□□ 0.69
COL16A1Q07092 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC19.39■□□□□ 0.69
COL16A1Q07092 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC19.39■□□□□ 0.69
COL16A1Q07092 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC19.39■□□□□ 0.69
COL16A1Q07092 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms