Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 AL365181.1-201ENST00000564032 1828 ntBASIC8.91□□□□□ -0.98
HSPG2P98160 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 FAM226B-201ENST00000602508 1490 ntBASIC8.91□□□□□ -0.98
HSPG2P98160 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
HSPG2P98160 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC8.91□□□□□ -0.98
HSPG2P98160 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC8.91□□□□□ -0.98
HSPG2P98160 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC8.91□□□□□ -0.98
HSPG2P98160 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 CRIP1P2-201ENST00000425396 228 ntBASIC8.91□□□□□ -0.98
HSPG2P98160 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC8.91□□□□□ -0.98
HSPG2P98160 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC8.91□□□□□ -0.98
HSPG2P98160 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC8.91□□□□□ -0.98
HSPG2P98160 AC048382.6-201ENST00000621980 1223 ntBASIC8.91□□□□□ -0.98
HSPG2P98160 ESR1-214ENST00000638569 132 ntTSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC8.91□□□□□ -0.98
HSPG2P98160 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 CICP13-201ENST00000422015 2789 ntBASIC8.91□□□□□ -0.98
HSPG2P98160 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC8.91□□□□□ -0.98
HSPG2P98160 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC8.91□□□□□ -0.98
HSPG2P98160 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC8.91□□□□□ -0.98
HSPG2P98160 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 AL035414.1-201ENST00000451327 857 ntBASIC8.91□□□□□ -0.98
HSPG2P98160 RN7SL69P-201ENST00000468423 272 ntBASIC8.91□□□□□ -0.98
HSPG2P98160 SNRPD2P2-201ENST00000473818 333 ntBASIC8.91□□□□□ -0.98
HSPG2P98160 RN7SKP155-201ENST00000516031 288 ntBASIC8.91□□□□□ -0.98
HSPG2P98160 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC8.91□□□□□ -0.98
HSPG2P98160 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC8.91□□□□□ -0.98
HSPG2P98160 Z82244.2-201ENST00000632196 448 ntBASIC8.91□□□□□ -0.98
HSPG2P98160 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 AC099398.1-201ENST00000567919 2776 ntBASIC8.91□□□□□ -0.98
HSPG2P98160 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
HSPG2P98160 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 AC007952.5-201ENST00000572818 1486 ntBASIC8.91□□□□□ -0.98
HSPG2P98160 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC8.91□□□□□ -0.98
HSPG2P98160 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC8.91□□□□□ -0.98
HSPG2P98160 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 AL008638.4-201ENST00000624792 1315 ntBASIC8.91□□□□□ -0.98
HSPG2P98160 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC8.91□□□□□ -0.98
HSPG2P98160 GGNBP1-204ENST00000613113 887 ntBASIC8.91□□□□□ -0.98
HSPG2P98160 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC8.91□□□□□ -0.98
HSPG2P98160 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC8.91□□□□□ -0.98
HSPG2P98160 AC139712.1-201ENST00000378256 1875 ntBASIC8.91□□□□□ -0.98
HSPG2P98160 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HSPG2P98160 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC8.91□□□□□ -0.98
HSPG2P98160 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC8.91□□□□□ -0.98
HSPG2P98160 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
HSPG2P98160 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
HSPG2P98160 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC8.9□□□□□ -0.98
HSPG2P98160 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC8.9□□□□□ -0.98
HSPG2P98160 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC8.9□□□□□ -0.98
HSPG2P98160 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC8.9□□□□□ -0.98
HSPG2P98160 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC8.9□□□□□ -0.98
HSPG2P98160 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC8.9□□□□□ -0.98
HSPG2P98160 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
HSPG2P98160 AC022080.1-201ENST00000366255 781 ntBASIC8.9□□□□□ -0.98
HSPG2P98160 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC8.9□□□□□ -0.98
HSPG2P98160 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC8.9□□□□□ -0.98
HSPG2P98160 FAM21EP-201ENST00000417804 985 ntBASIC8.9□□□□□ -0.98
HSPG2P98160 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms