Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
VBP1P61758 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.5□□□□□ -0.25
VBP1P61758 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VBP1P61758 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.5□□□□□ -0.25
VBP1P61758 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.5□□□□□ -0.25
VBP1P61758 MIR193BHG-211ENST00000641433 5365 ntBASIC13.49□□□□□ -0.25
VBP1P61758 AL445209.1-201ENST00000607269 3491 ntBASIC13.49□□□□□ -0.25
VBP1P61758 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.49□□□□□ -0.25
VBP1P61758 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
VBP1P61758 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.49□□□□□ -0.25
VBP1P61758 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
VBP1P61758 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.49□□□□□ -0.25
VBP1P61758 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.49□□□□□ -0.25
VBP1P61758 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.49□□□□□ -0.25
VBP1P61758 AC104457.1-201ENST00000401024 814 ntBASIC13.49□□□□□ -0.25
VBP1P61758 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.49□□□□□ -0.25
VBP1P61758 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.49□□□□□ -0.25
VBP1P61758 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.49□□□□□ -0.25
VBP1P61758 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.49□□□□□ -0.25
VBP1P61758 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.49□□□□□ -0.25
VBP1P61758 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.49□□□□□ -0.25
VBP1P61758 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.49□□□□□ -0.25
VBP1P61758 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.49□□□□□ -0.25
VBP1P61758 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.49□□□□□ -0.25
VBP1P61758 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.49□□□□□ -0.25
VBP1P61758 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
VBP1P61758 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.49□□□□□ -0.25
VBP1P61758 AC008735.5-201ENST00000623544 497 ntBASIC13.49□□□□□ -0.25
VBP1P61758 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.49□□□□□ -0.25
VBP1P61758 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.49□□□□□ -0.25
VBP1P61758 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.49□□□□□ -0.25
VBP1P61758 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
VBP1P61758 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.49□□□□□ -0.25
VBP1P61758 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.49□□□□□ -0.25
VBP1P61758 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VBP1P61758 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.48□□□□□ -0.25
VBP1P61758 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.48□□□□□ -0.25
VBP1P61758 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
VBP1P61758 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
VBP1P61758 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.48□□□□□ -0.25
VBP1P61758 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.48□□□□□ -0.25
VBP1P61758 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
VBP1P61758 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.48□□□□□ -0.25
VBP1P61758 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.48□□□□□ -0.25
VBP1P61758 AC105339.3-201ENST00000560043 636 ntBASIC13.48□□□□□ -0.25
VBP1P61758 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.48□□□□□ -0.25
VBP1P61758 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.48□□□□□ -0.25
VBP1P61758 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.48□□□□□ -0.25
VBP1P61758 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
VBP1P61758 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
VBP1P61758 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.48□□□□□ -0.25
VBP1P61758 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VBP1P61758 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.48□□□□□ -0.25
VBP1P61758 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.48□□□□□ -0.25
VBP1P61758 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms