Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.28□□□□□ -0.12
CASP9P55211 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CASP9P55211 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CASP9P55211 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CASP9P55211 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.28□□□□□ -0.12
CASP9P55211 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CASP9P55211 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.28□□□□□ -0.12
CASP9P55211 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CASP9P55211 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CASP9P55211 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CASP9P55211 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.27□□□□□ -0.12
CASP9P55211 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.27□□□□□ -0.12
CASP9P55211 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CASP9P55211 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.27□□□□□ -0.12
CASP9P55211 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.27□□□□□ -0.12
CASP9P55211 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.27□□□□□ -0.12
CASP9P55211 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CASP9P55211 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CASP9P55211 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.27□□□□□ -0.12
CASP9P55211 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CASP9P55211 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.27□□□□□ -0.12
CASP9P55211 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CASP9P55211 DRD5P1-201ENST00000456605 1438 ntBASIC14.27□□□□□ -0.12
CASP9P55211 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CASP9P55211 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.27□□□□□ -0.13
CASP9P55211 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.27□□□□□ -0.13
CASP9P55211 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.27□□□□□ -0.13
CASP9P55211 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.27□□□□□ -0.13
CASP9P55211 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CASP9P55211 BCRP1-201ENST00000444246 691 ntBASIC14.27□□□□□ -0.13
CASP9P55211 VDAC1P7-201ENST00000462417 847 ntBASIC14.27□□□□□ -0.13
CASP9P55211 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CASP9P55211 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.27□□□□□ -0.13
CASP9P55211 DOC2GP-202ENST00000514950 1163 ntBASIC14.27□□□□□ -0.13
CASP9P55211 TPRX2P-201ENST00000535362 881 ntBASIC14.27□□□□□ -0.13
CASP9P55211 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.27□□□□□ -0.13
CASP9P55211 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.27□□□□□ -0.13
CASP9P55211 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.27□□□□□ -0.13
CASP9P55211 AL049840.4-201ENST00000602422 811 ntBASIC14.27□□□□□ -0.13
CASP9P55211 AL096865.1-201ENST00000606796 927 ntBASIC14.27□□□□□ -0.13
CASP9P55211 AC107373.2-201ENST00000607735 490 ntBASIC14.27□□□□□ -0.13
CASP9P55211 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASP9P55211 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASP9P55211 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASP9P55211 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASP9P55211 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CASP9P55211 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASP9P55211 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASP9P55211 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CASP9P55211 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASP9P55211 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CASP9P55211 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASP9P55211 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASP9P55211 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.27□□□□□ -0.13
CASP9P55211 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CASP9P55211 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CASP9P55211 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CASP9P55211 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.26□□□□□ -0.13
CASP9P55211 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.26□□□□□ -0.13
CASP9P55211 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CASP9P55211 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.26□□□□□ -0.13
CASP9P55211 GAPDHP40-201ENST00000505218 1006 ntBASIC14.26□□□□□ -0.13
CASP9P55211 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.26□□□□□ -0.13
CASP9P55211 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.26□□□□□ -0.13
CASP9P55211 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.26□□□□□ -0.13
CASP9P55211 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CASP9P55211 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.26□□□□□ -0.13
CASP9P55211 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.26□□□□□ -0.13
CASP9P55211 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.26□□□□□ -0.13
CASP9P55211 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CASP9P55211 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.26□□□□□ -0.13
CASP9P55211 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CASP9P55211 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CASP9P55211 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
CASP9P55211 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CASP9P55211 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CASP9P55211 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms