Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.16■□□□□ 0.02
LIMK2P53671 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LIMK2P53671 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LIMK2P53671 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.15■□□□□ 0.02
LIMK2P53671 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.15■□□□□ 0.02
LIMK2P53671 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.15■□□□□ 0.02
LIMK2P53671 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LIMK2P53671 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LIMK2P53671 AC134915.1-201ENST00000426461 574 ntBASIC15.15■□□□□ 0.02
LIMK2P53671 ACTG1P3-201ENST00000431775 1114 ntBASIC15.15■□□□□ 0.02
LIMK2P53671 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.15■□□□□ 0.02
LIMK2P53671 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.15■□□□□ 0.02
LIMK2P53671 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.15■□□□□ 0.02
LIMK2P53671 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.15■□□□□ 0.02
LIMK2P53671 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.15■□□□□ 0.02
LIMK2P53671 ENPP7P5-201ENST00000541031 1031 ntBASIC15.15■□□□□ 0.02
LIMK2P53671 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 AL359711.2-201ENST00000563105 872 ntBASIC15.15■□□□□ 0.02
LIMK2P53671 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.15■□□□□ 0.02
LIMK2P53671 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.15■□□□□ 0.02
LIMK2P53671 AC233724.13-201ENST00000598383 410 ntBASIC15.15■□□□□ 0.02
LIMK2P53671 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LIMK2P53671 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.15■□□□□ 0.02
LIMK2P53671 COX11-210ENST00000639671 696 ntBASIC15.15■□□□□ 0.02
LIMK2P53671 AC117489.1-201ENST00000625169 3217 ntBASIC15.15■□□□□ 0.02
LIMK2P53671 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LIMK2P53671 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.15■□□□□ 0.02
LIMK2P53671 DRD5P1-201ENST00000456605 1438 ntBASIC15.15■□□□□ 0.02
LIMK2P53671 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.15■□□□□ 0.02
LIMK2P53671 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.15■□□□□ 0.02
LIMK2P53671 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LIMK2P53671 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
LIMK2P53671 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.15■□□□□ 0.02
LIMK2P53671 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LIMK2P53671 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LIMK2P53671 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.14■□□□□ 0.01
LIMK2P53671 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.14■□□□□ 0.01
LIMK2P53671 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 AC023090.2-201ENST00000625182 2110 ntBASIC15.14■□□□□ 0.01
LIMK2P53671 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.14■□□□□ 0.01
LIMK2P53671 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LIMK2P53671 AL137783.1-201ENST00000623494 1896 ntBASIC15.14■□□□□ 0.01
LIMK2P53671 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.14■□□□□ 0.01
LIMK2P53671 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
LIMK2P53671 AL158070.2-201ENST00000623713 1621 ntBASIC15.14■□□□□ 0.01
LIMK2P53671 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.14■□□□□ 0.01
LIMK2P53671 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LIMK2P53671 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
LIMK2P53671 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.14■□□□□ 0.01
LIMK2P53671 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.14■□□□□ 0.01
LIMK2P53671 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.14■□□□□ 0.01
LIMK2P53671 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.14■□□□□ 0.01
LIMK2P53671 TPT1P11-201ENST00000458482 498 ntBASIC15.14■□□□□ 0.01
LIMK2P53671 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 AC119751.2-201ENST00000504529 210 ntBASIC15.14■□□□□ 0.01
LIMK2P53671 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.14■□□□□ 0.01
LIMK2P53671 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.14■□□□□ 0.01
LIMK2P53671 SLC25A47P1-201ENST00000531577 414 ntBASIC15.14■□□□□ 0.01
LIMK2P53671 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.14■□□□□ 0.01
LIMK2P53671 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LIMK2P53671 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.14■□□□□ 0.01
LIMK2P53671 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.14■□□□□ 0.01
LIMK2P53671 MIR4259-201ENST00000584466 101 ntBASIC15.14■□□□□ 0.01
LIMK2P53671 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.14■□□□□ 0.01
LIMK2P53671 AC133552.6-201ENST00000613406 534 ntBASIC15.14■□□□□ 0.01
LIMK2P53671 MIR6775-201ENST00000617557 69 ntBASIC15.14■□□□□ 0.01
LIMK2P53671 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms