Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CSNK1DP48730 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CSNK1DP48730 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CSNK1DP48730 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
CSNK1DP48730 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CSNK1DP48730 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
CSNK1DP48730 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.96□□□□□ -0.02
CSNK1DP48730 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.96□□□□□ -0.02
CSNK1DP48730 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CSNK1DP48730 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CSNK1DP48730 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.95□□□□□ -0.02
CSNK1DP48730 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
CSNK1DP48730 AL354702.1-201ENST00000442006 1960 ntBASIC14.95□□□□□ -0.02
CSNK1DP48730 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.95□□□□□ -0.02
CSNK1DP48730 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 BRWD1P1-201ENST00000401091 371 ntBASIC14.95□□□□□ -0.02
CSNK1DP48730 POM121L10P-201ENST00000436994 1285 ntBASIC14.95□□□□□ -0.02
CSNK1DP48730 AC007274.1-201ENST00000439805 662 ntBASIC14.95□□□□□ -0.02
CSNK1DP48730 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.95□□□□□ -0.02
CSNK1DP48730 PFN1P12-201ENST00000455938 534 ntBASIC14.95□□□□□ -0.02
CSNK1DP48730 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.95□□□□□ -0.02
CSNK1DP48730 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.95□□□□□ -0.02
CSNK1DP48730 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.95□□□□□ -0.02
CSNK1DP48730 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.95□□□□□ -0.02
CSNK1DP48730 AC132192.2-201ENST00000596206 1147 ntBASIC14.95□□□□□ -0.02
CSNK1DP48730 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.95□□□□□ -0.02
CSNK1DP48730 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.95□□□□□ -0.02
CSNK1DP48730 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.95□□□□□ -0.02
CSNK1DP48730 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.95□□□□□ -0.02
CSNK1DP48730 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CSNK1DP48730 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.95□□□□□ -0.02
CSNK1DP48730 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CSNK1DP48730 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.95□□□□□ -0.02
CSNK1DP48730 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CSNK1DP48730 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.95□□□□□ -0.02
CSNK1DP48730 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSNK1DP48730 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1DP48730 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CSNK1DP48730 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.94□□□□□ -0.02
CSNK1DP48730 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.94□□□□□ -0.02
CSNK1DP48730 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CSNK1DP48730 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CSNK1DP48730 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1DP48730 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CSNK1DP48730 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1DP48730 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CSNK1DP48730 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1DP48730 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.94□□□□□ -0.02
CSNK1DP48730 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
CSNK1DP48730 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1DP48730 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.94□□□□□ -0.02
CSNK1DP48730 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.94□□□□□ -0.02
CSNK1DP48730 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.94□□□□□ -0.02
CSNK1DP48730 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.94□□□□□ -0.02
CSNK1DP48730 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.94□□□□□ -0.02
CSNK1DP48730 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CSNK1DP48730 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1DP48730 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.94□□□□□ -0.02
CSNK1DP48730 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.94□□□□□ -0.02
CSNK1DP48730 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.94□□□□□ -0.02
CSNK1DP48730 MIR4783-201ENST00000580343 82 ntBASIC14.94□□□□□ -0.02
CSNK1DP48730 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.94□□□□□ -0.02
CSNK1DP48730 AC091271.1-201ENST00000611877 1162 ntBASIC14.94□□□□□ -0.02
CSNK1DP48730 AL096828.3-201ENST00000615354 462 ntBASIC14.94□□□□□ -0.02
CSNK1DP48730 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.94□□□□□ -0.02
CSNK1DP48730 AL162426.1-201ENST00000624141 743 ntBASIC14.94□□□□□ -0.02
CSNK1DP48730 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.94□□□□□ -0.02
CSNK1DP48730 AC139712.1-201ENST00000378256 1875 ntBASIC14.94□□□□□ -0.02
CSNK1DP48730 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1DP48730 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1DP48730 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.94□□□□□ -0.02
CSNK1DP48730 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1DP48730 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.94□□□□□ -0.02
CSNK1DP48730 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1DP48730 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1DP48730 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.94□□□□□ -0.02
CSNK1DP48730 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1DP48730 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1DP48730 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1DP48730 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSNK1DP48730 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.94□□□□□ -0.02
CSNK1DP48730 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms