Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC16.65■□□□□ 0.26
TM4SF4P48230 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.65■□□□□ 0.26
TM4SF4P48230 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF4P48230 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF4P48230 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF4P48230 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF4P48230 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.65■□□□□ 0.26
TM4SF4P48230 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TM4SF4P48230 AC010491.1-201ENST00000563101 2797 ntBASIC16.65■□□□□ 0.26
TM4SF4P48230 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
TM4SF4P48230 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF4P48230 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.64■□□□□ 0.25
TM4SF4P48230 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF4P48230 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF4P48230 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF4P48230 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF4P48230 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF4P48230 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF4P48230 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF4P48230 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF4P48230 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF4P48230 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF4P48230 AP000354.1-201ENST00000396982 456 ntBASIC16.64■□□□□ 0.25
TM4SF4P48230 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.64■□□□□ 0.25
TM4SF4P48230 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.64■□□□□ 0.25
TM4SF4P48230 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.64■□□□□ 0.25
TM4SF4P48230 BCRP4-201ENST00000506079 804 ntBASIC16.64■□□□□ 0.25
TM4SF4P48230 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF4P48230 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.64■□□□□ 0.25
TM4SF4P48230 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC16.64■□□□□ 0.25
TM4SF4P48230 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TM4SF4P48230 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC16.64■□□□□ 0.25
TM4SF4P48230 AC233280.19-201ENST00000633223 136 ntBASIC16.64■□□□□ 0.25
TM4SF4P48230 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC16.64■□□□□ 0.25
TM4SF4P48230 AC139712.1-201ENST00000378256 1875 ntBASIC16.64■□□□□ 0.25
TM4SF4P48230 AL591122.2-201ENST00000624125 1853 ntBASIC16.64■□□□□ 0.25
TM4SF4P48230 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF4P48230 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
TM4SF4P48230 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF4P48230 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.64■□□□□ 0.25
TM4SF4P48230 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF4P48230 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF4P48230 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM4SF4P48230 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.63■□□□□ 0.25
TM4SF4P48230 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.63■□□□□ 0.25
TM4SF4P48230 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TM4SF4P48230 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TM4SF4P48230 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TM4SF4P48230 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TM4SF4P48230 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
TM4SF4P48230 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.63■□□□□ 0.25
TM4SF4P48230 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.63■□□□□ 0.25
TM4SF4P48230 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TM4SF4P48230 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TM4SF4P48230 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TM4SF4P48230 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.63■□□□□ 0.25
TM4SF4P48230 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC16.63■□□□□ 0.25
TM4SF4P48230 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
TM4SF4P48230 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 AC140658.4-201ENST00000561990 352 ntBASIC16.63■□□□□ 0.25
TM4SF4P48230 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.63■□□□□ 0.25
TM4SF4P48230 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.63■□□□□ 0.25
TM4SF4P48230 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC16.63■□□□□ 0.25
TM4SF4P48230 AC090386.2-201ENST00000623010 1039 ntBASIC16.63■□□□□ 0.25
TM4SF4P48230 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC16.63■□□□□ 0.25
TM4SF4P48230 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.63■□□□□ 0.25
TM4SF4P48230 SSR4P1-203ENST00000599569 2260 ntBASIC16.63■□□□□ 0.25
TM4SF4P48230 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.63■□□□□ 0.25
TM4SF4P48230 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.63■□□□□ 0.25
TM4SF4P48230 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TM4SF4P48230 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.63■□□□□ 0.25
TM4SF4P48230 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.63■□□□□ 0.25
TM4SF4P48230 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TM4SF4P48230 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TM4SF4P48230 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.62■□□□□ 0.25
TM4SF4P48230 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms