Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
NEDD4P46934 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.59■□□□□ 0.41
NEDD4P46934 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4P46934 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.59■□□□□ 0.41
NEDD4P46934 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.59■□□□□ 0.41
NEDD4P46934 AC010328.2-201ENST00000597698 1111 ntBASIC17.59■□□□□ 0.41
NEDD4P46934 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.59■□□□□ 0.41
NEDD4P46934 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4P46934 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NEDD4P46934 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4P46934 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4P46934 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.59■□□□□ 0.41
NEDD4P46934 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4P46934 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4P46934 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
NEDD4P46934 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NEDD4P46934 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
NEDD4P46934 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.58■□□□□ 0.41
NEDD4P46934 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
NEDD4P46934 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.58■□□□□ 0.41
NEDD4P46934 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NEDD4P46934 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NEDD4P46934 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.58■□□□□ 0.4
NEDD4P46934 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NEDD4P46934 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEDD4P46934 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NEDD4P46934 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.58■□□□□ 0.4
NEDD4P46934 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.58■□□□□ 0.4
NEDD4P46934 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.58■□□□□ 0.4
NEDD4P46934 FAM86HP-204ENST00000513466 959 ntBASIC17.58■□□□□ 0.4
NEDD4P46934 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.58■□□□□ 0.4
NEDD4P46934 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.58■□□□□ 0.4
NEDD4P46934 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.58■□□□□ 0.4
NEDD4P46934 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.58■□□□□ 0.4
NEDD4P46934 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.58■□□□□ 0.4
NEDD4P46934 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.58■□□□□ 0.4
NEDD4P46934 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.58■□□□□ 0.4
NEDD4P46934 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NEDD4P46934 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NEDD4P46934 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEDD4P46934 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
NEDD4P46934 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEDD4P46934 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEDD4P46934 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.58■□□□□ 0.4
NEDD4P46934 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NEDD4P46934 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEDD4P46934 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.58■□□□□ 0.4
NEDD4P46934 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEDD4P46934 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NEDD4P46934 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEDD4P46934 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD4P46934 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
NEDD4P46934 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.57■□□□□ 0.4
NEDD4P46934 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD4P46934 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NEDD4P46934 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD4P46934 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.57■□□□□ 0.4
NEDD4P46934 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NEDD4P46934 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NEDD4P46934 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD4P46934 AL355994.2-201ENST00000447882 704 ntBASIC17.57■□□□□ 0.4
NEDD4P46934 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.57■□□□□ 0.4
NEDD4P46934 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.57■□□□□ 0.4
NEDD4P46934 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.57■□□□□ 0.4
NEDD4P46934 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.57■□□□□ 0.4
NEDD4P46934 EEF1DP1-201ENST00000585891 896 ntBASIC17.57■□□□□ 0.4
NEDD4P46934 MIR6752-201ENST00000618442 71 ntBASIC17.57■□□□□ 0.4
NEDD4P46934 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD4P46934 AP001002.3-201ENST00000623482 206 ntBASIC17.57■□□□□ 0.4
NEDD4P46934 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.57■□□□□ 0.4
NEDD4P46934 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD4P46934 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD4P46934 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD4P46934 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD4P46934 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD4P46934 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD4P46934 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD4P46934 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD4P46934 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD4P46934 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.57■□□□□ 0.4
NEDD4P46934 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD4P46934 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.57■□□□□ 0.4
NEDD4P46934 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
NEDD4P46934 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD4P46934 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.57■□□□□ 0.4
NEDD4P46934 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.56■□□□□ 0.4
NEDD4P46934 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NEDD4P46934 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NEDD4P46934 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD4P46934 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD4P46934 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD4P46934 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD4P46934 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.56■□□□□ 0.4
NEDD4P46934 AL354702.1-201ENST00000442006 1960 ntBASIC17.56■□□□□ 0.4
NEDD4P46934 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD4P46934 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.56■□□□□ 0.4
NEDD4P46934 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.56■□□□□ 0.4
NEDD4P46934 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.56■□□□□ 0.4
NEDD4P46934 RN7SL560P-201ENST00000577943 264 ntBASIC17.56■□□□□ 0.4
NEDD4P46934 MIR4783-201ENST00000580343 82 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms