Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC063926.3-201ENST00000624734 5658 ntBASIC14.91□□□□□ -0.02
HMGCLP35914 AC232323.1-201ENST00000540724 2099 ntBASIC14.91□□□□□ -0.02
HMGCLP35914 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.91□□□□□ -0.02
HMGCLP35914 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.9□□□□□ -0.02
HMGCLP35914 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.9□□□□□ -0.02
HMGCLP35914 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGCLP35914 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGCLP35914 AC007292.2-201ENST00000593524 1812 ntBASIC14.9□□□□□ -0.02
HMGCLP35914 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 PKD1P5-201ENST00000532415 10291 ntBASIC14.9□□□□□ -0.02
HMGCLP35914 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.9□□□□□ -0.02
HMGCLP35914 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 MIR1202-201ENST00000408529 83 ntBASIC14.9□□□□□ -0.02
HMGCLP35914 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGCLP35914 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.9□□□□□ -0.02
HMGCLP35914 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
HMGCLP35914 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.9□□□□□ -0.02
HMGCLP35914 AC022210.1-201ENST00000449856 793 ntBASIC14.9□□□□□ -0.02
HMGCLP35914 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.9□□□□□ -0.02
HMGCLP35914 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.9□□□□□ -0.02
HMGCLP35914 COX5BP1-201ENST00000507622 393 ntBASIC14.9□□□□□ -0.02
HMGCLP35914 SNX29P1-201ENST00000548357 1007 ntBASIC14.9□□□□□ -0.02
HMGCLP35914 AC023310.1-201ENST00000554836 735 ntBASIC14.9□□□□□ -0.02
HMGCLP35914 C2orf69P2-201ENST00000562032 1123 ntBASIC14.9□□□□□ -0.02
HMGCLP35914 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.9□□□□□ -0.02
HMGCLP35914 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.9□□□□□ -0.02
HMGCLP35914 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.9□□□□□ -0.02
HMGCLP35914 AC017083.2-201ENST00000608069 979 ntBASIC14.9□□□□□ -0.02
HMGCLP35914 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
HMGCLP35914 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGCLP35914 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
HMGCLP35914 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGCLP35914 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HMGCLP35914 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGCLP35914 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.9□□□□□ -0.02
HMGCLP35914 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.9□□□□□ -0.02
HMGCLP35914 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 AC092135.3-201ENST00000624151 1846 ntBASIC14.89□□□□□ -0.03
HMGCLP35914 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HMGCLP35914 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.89□□□□□ -0.03
HMGCLP35914 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
HMGCLP35914 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGCLP35914 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HMGCLP35914 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
HMGCLP35914 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGCLP35914 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HMGCLP35914 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.89□□□□□ -0.03
HMGCLP35914 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGCLP35914 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.89□□□□□ -0.03
HMGCLP35914 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGCLP35914 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 OR8S1-201ENST00000310194 1080 ntBASIC14.89□□□□□ -0.03
HMGCLP35914 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HMGCLP35914 AC004945.1-201ENST00000416738 983 ntBASIC14.89□□□□□ -0.03
HMGCLP35914 AC026954.1-201ENST00000429771 1293 ntBASIC14.89□□□□□ -0.03
HMGCLP35914 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.89□□□□□ -0.03
HMGCLP35914 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.89□□□□□ -0.03
HMGCLP35914 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.89□□□□□ -0.03
HMGCLP35914 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGCLP35914 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.89□□□□□ -0.03
HMGCLP35914 AC073413.1-201ENST00000603927 732 ntBASIC14.89□□□□□ -0.03
HMGCLP35914 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.89□□□□□ -0.03
HMGCLP35914 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HMGCLP35914 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 AC113367.3-201ENST00000508316 1912 ntBASIC14.89□□□□□ -0.03
HMGCLP35914 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.89□□□□□ -0.03
HMGCLP35914 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGCLP35914 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCLP35914 AC140479.7-201ENST00000636301 2332 ntBASIC14.89□□□□□ -0.03
HMGCLP35914 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms