Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC6A4P31645 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 E2F3P2-201ENST00000447755 1422 ntBASIC15.34■□□□□ 0.05
SLC6A4P31645 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
SLC6A4P31645 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC6A4P31645 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC6A4P31645 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.33■□□□□ 0.05
SLC6A4P31645 AC018529.2-202ENST00000611482 3087 ntBASIC15.33■□□□□ 0.05
SLC6A4P31645 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC6A4P31645 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC6A4P31645 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC6A4P31645 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC6A4P31645 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.33■□□□□ 0.05
SLC6A4P31645 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
SLC6A4P31645 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.33■□□□□ 0.04
SLC6A4P31645 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A4P31645 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SLC6A4P31645 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A4P31645 AC018442.1-201ENST00000421439 2061 ntBASIC15.33■□□□□ 0.04
SLC6A4P31645 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A4P31645 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A4P31645 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A4P31645 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SLC6A4P31645 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SLC6A4P31645 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC6A4P31645 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC6A4P31645 AC010141.1-201ENST00000411585 623 ntBASIC15.33■□□□□ 0.04
SLC6A4P31645 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.33■□□□□ 0.04
SLC6A4P31645 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.33■□□□□ 0.04
SLC6A4P31645 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A4P31645 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC6A4P31645 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.33■□□□□ 0.04
SLC6A4P31645 FAM8A2P-201ENST00000528813 1142 ntBASIC15.33■□□□□ 0.04
SLC6A4P31645 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC6A4P31645 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC6A4P31645 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A4P31645 AC243960.2-201ENST00000600996 747 ntBASIC15.33■□□□□ 0.04
SLC6A4P31645 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A4P31645 SHC1P1-201ENST00000425230 1745 ntBASIC15.33■□□□□ 0.04
SLC6A4P31645 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A4P31645 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A4P31645 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A4P31645 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A4P31645 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SLC6A4P31645 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SLC6A4P31645 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A4P31645 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SLC6A4P31645 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC6A4P31645 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC6A4P31645 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A4P31645 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A4P31645 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC6A4P31645 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A4P31645 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC6A4P31645 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC6A4P31645 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
SLC6A4P31645 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC6A4P31645 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC6A4P31645 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC6A4P31645 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC6A4P31645 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC6A4P31645 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC6A4P31645 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.32■□□□□ 0.04
SLC6A4P31645 AC006033.1-201ENST00000440505 426 ntBASIC15.32■□□□□ 0.04
SLC6A4P31645 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC6A4P31645 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC6A4P31645 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
SLC6A4P31645 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC6A4P31645 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC6A4P31645 AC009955.4-201ENST00000597192 544 ntBASIC15.32■□□□□ 0.04
SLC6A4P31645 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 BX088702.1-201ENST00000610784 235 ntBASIC15.32■□□□□ 0.04
SLC6A4P31645 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC6A4P31645 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC6A4P31645 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
SLC6A4P31645 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC6A4P31645 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC6A4P31645 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC6A4P31645 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC6A4P31645 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms