Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PTPN6P29350 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTPN6P29350 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTPN6P29350 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PTPN6P29350 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTPN6P29350 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PTPN6P29350 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PTPN6P29350 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTPN6P29350 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PTPN6P29350 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.26□□□□□ -0.13
PTPN6P29350 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.26□□□□□ -0.13
PTPN6P29350 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.26□□□□□ -0.13
PTPN6P29350 AGGF1P1-201ENST00000509500 2073 ntBASIC14.26□□□□□ -0.13
PTPN6P29350 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.26□□□□□ -0.13
PTPN6P29350 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.26□□□□□ -0.13
PTPN6P29350 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PTPN6P29350 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 ELK1P1-201ENST00000485699 580 ntBASIC14.26□□□□□ -0.13
PTPN6P29350 AC104596.2-201ENST00000512793 793 ntBASIC14.26□□□□□ -0.13
PTPN6P29350 AC022447.6-201ENST00000515522 438 ntBASIC14.26□□□□□ -0.13
PTPN6P29350 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.26□□□□□ -0.13
PTPN6P29350 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.26□□□□□ -0.13
PTPN6P29350 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.26□□□□□ -0.13
PTPN6P29350 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.26□□□□□ -0.13
PTPN6P29350 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.26□□□□□ -0.13
PTPN6P29350 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.26□□□□□ -0.13
PTPN6P29350 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PTPN6P29350 MIR8072-201ENST00000614241 80 ntBASIC14.26□□□□□ -0.13
PTPN6P29350 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.26□□□□□ -0.13
PTPN6P29350 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PTPN6P29350 PRSS30P-206ENST00000641773 873 ntBASIC14.26□□□□□ -0.13
PTPN6P29350 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.26□□□□□ -0.13
PTPN6P29350 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.26□□□□□ -0.13
PTPN6P29350 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.26□□□□□ -0.13
PTPN6P29350 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.26□□□□□ -0.13
PTPN6P29350 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PTPN6P29350 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PTPN6P29350 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.26□□□□□ -0.13
PTPN6P29350 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.26□□□□□ -0.13
PTPN6P29350 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PTPN6P29350 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PTPN6P29350 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.26□□□□□ -0.13
PTPN6P29350 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.26□□□□□ -0.13
PTPN6P29350 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.25□□□□□ -0.13
PTPN6P29350 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.25□□□□□ -0.13
PTPN6P29350 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.25□□□□□ -0.13
PTPN6P29350 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PTPN6P29350 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PTPN6P29350 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PTPN6P29350 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.25□□□□□ -0.13
PTPN6P29350 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PTPN6P29350 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.25□□□□□ -0.13
PTPN6P29350 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.25□□□□□ -0.13
PTPN6P29350 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.25□□□□□ -0.13
PTPN6P29350 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.25□□□□□ -0.13
PTPN6P29350 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.25□□□□□ -0.13
PTPN6P29350 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.25□□□□□ -0.13
PTPN6P29350 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.25□□□□□ -0.13
PTPN6P29350 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.25□□□□□ -0.13
PTPN6P29350 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.25□□□□□ -0.13
PTPN6P29350 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.25□□□□□ -0.13
PTPN6P29350 TMEM261P1-201ENST00000604899 340 ntBASIC14.25□□□□□ -0.13
PTPN6P29350 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
PTPN6P29350 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.25□□□□□ -0.13
PTPN6P29350 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.25□□□□□ -0.13
PTPN6P29350 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PTPN6P29350 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTPN6P29350 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms