Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 RN7SL832P-201ENST00000607781 1756 ntBASIC12.89□□□□□ -0.35
CCL1P22362 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.89□□□□□ -0.35
CCL1P22362 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 TCAM1P-207ENST00000485295 1537 ntBASIC12.89□□□□□ -0.35
CCL1P22362 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CCL1P22362 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.89□□□□□ -0.35
CCL1P22362 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CCL1P22362 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
CCL1P22362 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 RN7SKP230-201ENST00000365642 335 ntBASIC12.89□□□□□ -0.35
CCL1P22362 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CCL1P22362 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.89□□□□□ -0.35
CCL1P22362 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 SERBP1P5-201ENST00000510079 1181 ntBASIC12.89□□□□□ -0.35
CCL1P22362 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.89□□□□□ -0.35
CCL1P22362 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 AL132655.2-201ENST00000596276 594 ntBASIC12.89□□□□□ -0.35
CCL1P22362 AC004466.1-201ENST00000599515 1080 ntBASIC12.89□□□□□ -0.35
CCL1P22362 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.89□□□□□ -0.35
CCL1P22362 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.89□□□□□ -0.35
CCL1P22362 AC006538.3-201ENST00000612495 578 ntBASIC12.89□□□□□ -0.35
CCL1P22362 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
CCL1P22362 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.89□□□□□ -0.35
CCL1P22362 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CCL1P22362 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CCL1P22362 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 OR2I1P-209ENST00000641730 5365 ntBASIC12.89□□□□□ -0.35
CCL1P22362 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.88□□□□□ -0.35
CCL1P22362 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.88□□□□□ -0.35
CCL1P22362 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.88□□□□□ -0.35
CCL1P22362 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CCL1P22362 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CCL1P22362 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CCL1P22362 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.88□□□□□ -0.35
CCL1P22362 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.88□□□□□ -0.35
CCL1P22362 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.88□□□□□ -0.35
CCL1P22362 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CCL1P22362 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.88□□□□□ -0.35
CCL1P22362 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.88□□□□□ -0.35
CCL1P22362 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 CYMP-203ENST00000474680 1263 ntBASIC12.88□□□□□ -0.35
CCL1P22362 ELK1P1-201ENST00000485699 580 ntBASIC12.88□□□□□ -0.35
CCL1P22362 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.88□□□□□ -0.35
CCL1P22362 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.88□□□□□ -0.35
CCL1P22362 AC138696.2-201ENST00000607376 223 ntBASIC12.88□□□□□ -0.35
CCL1P22362 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL1P22362 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CCL1P22362 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CCL1P22362 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.88□□□□□ -0.35
CCL1P22362 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms