Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HLA-DOBP13765 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HLA-DOBP13765 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.48□□□□□ -0.25
HLA-DOBP13765 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HLA-DOBP13765 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-DOBP13765 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.48□□□□□ -0.25
HLA-DOBP13765 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 GIMAP3P-201ENST00000495150 836 ntBASIC13.48□□□□□ -0.25
HLA-DOBP13765 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HLA-DOBP13765 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 AC010319.3-201ENST00000597028 470 ntBASIC13.48□□□□□ -0.25
HLA-DOBP13765 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HLA-DOBP13765 AC026748.1-201ENST00000624349 3251 ntBASIC13.48□□□□□ -0.25
HLA-DOBP13765 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-DOBP13765 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 OR2I1P-210ENST00000642037 4691 ntBASIC13.48□□□□□ -0.25
HLA-DOBP13765 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 AP001267.2-201ENST00000532619 2086 ntBASIC13.48□□□□□ -0.25
HLA-DOBP13765 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 ACTG1P3-201ENST00000431775 1114 ntBASIC13.47□□□□□ -0.25
HLA-DOBP13765 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 RN7SL837P-201ENST00000463010 287 ntBASIC13.47□□□□□ -0.25
HLA-DOBP13765 RN7SL752P-201ENST00000463779 287 ntBASIC13.47□□□□□ -0.25
HLA-DOBP13765 KRT18P25-201ENST00000508931 1278 ntBASIC13.47□□□□□ -0.25
HLA-DOBP13765 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 AP005018.1-201ENST00000525475 301 ntBASIC13.47□□□□□ -0.25
HLA-DOBP13765 TDH-203ENST00000531764 1110 ntBASIC13.47□□□□□ -0.25
HLA-DOBP13765 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 AC009486.1-201ENST00000569860 813 ntBASIC13.47□□□□□ -0.25
HLA-DOBP13765 MIR5189-201ENST00000577370 114 ntBASIC13.47□□□□□ -0.25
HLA-DOBP13765 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 AC113367.3-201ENST00000508316 1912 ntBASIC13.47□□□□□ -0.25
HLA-DOBP13765 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DOBP13765 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DOBP13765 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DOBP13765 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.46□□□□□ -0.25
HLA-DOBP13765 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DOBP13765 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.46□□□□□ -0.25
HLA-DOBP13765 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms