Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHGBP05060 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.94■□□□□ 0.46
CHGBP05060 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHGBP05060 AL355994.2-201ENST00000447882 704 ntBASIC17.94■□□□□ 0.46
CHGBP05060 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.94■□□□□ 0.46
CHGBP05060 GCOM2-201ENST00000509133 1104 ntBASIC17.94■□□□□ 0.46
CHGBP05060 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHGBP05060 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHGBP05060 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.94■□□□□ 0.46
CHGBP05060 AC005695.3-201ENST00000614522 232 ntBASIC17.94■□□□□ 0.46
CHGBP05060 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.94■□□□□ 0.46
CHGBP05060 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHGBP05060 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHGBP05060 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHGBP05060 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHGBP05060 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHGBP05060 INTS4P1-203ENST00000641008 3683 ntBASIC17.94■□□□□ 0.46
CHGBP05060 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.94■□□□□ 0.46
CHGBP05060 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.94■□□□□ 0.46
CHGBP05060 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHGBP05060 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHGBP05060 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CHGBP05060 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHGBP05060 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHGBP05060 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHGBP05060 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHGBP05060 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHGBP05060 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHGBP05060 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.93■□□□□ 0.46
CHGBP05060 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.93■□□□□ 0.46
CHGBP05060 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.93■□□□□ 0.46
CHGBP05060 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHGBP05060 ACTBP11-201ENST00000436287 1126 ntBASIC17.93■□□□□ 0.46
CHGBP05060 KLF2P1-201ENST00000447438 1042 ntBASIC17.93■□□□□ 0.46
CHGBP05060 AC092658.1-201ENST00000505836 891 ntBASIC17.93■□□□□ 0.46
CHGBP05060 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.93■□□□□ 0.46
CHGBP05060 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.93■□□□□ 0.46
CHGBP05060 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.93■□□□□ 0.46
CHGBP05060 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.93■□□□□ 0.46
CHGBP05060 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHGBP05060 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CHGBP05060 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.93■□□□□ 0.46
CHGBP05060 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.93■□□□□ 0.46
CHGBP05060 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHGBP05060 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHGBP05060 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
CHGBP05060 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.93■□□□□ 0.46
CHGBP05060 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHGBP05060 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.93■□□□□ 0.46
CHGBP05060 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHGBP05060 AL354702.1-201ENST00000442006 1960 ntBASIC17.93■□□□□ 0.46
CHGBP05060 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CHGBP05060 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.93■□□□□ 0.46
CHGBP05060 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.93■□□□□ 0.46
CHGBP05060 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.92■□□□□ 0.46
CHGBP05060 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.92■□□□□ 0.46
CHGBP05060 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.92■□□□□ 0.46
CHGBP05060 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHGBP05060 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.92■□□□□ 0.46
CHGBP05060 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHGBP05060 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.92■□□□□ 0.46
CHGBP05060 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHGBP05060 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.92■□□□□ 0.46
CHGBP05060 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.92■□□□□ 0.46
CHGBP05060 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.92■□□□□ 0.46
CHGBP05060 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHGBP05060 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.92■□□□□ 0.46
CHGBP05060 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.92■□□□□ 0.46
CHGBP05060 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.92■□□□□ 0.46
CHGBP05060 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.92■□□□□ 0.46
CHGBP05060 EEF1DP1-201ENST00000585891 896 ntBASIC17.92■□□□□ 0.46
CHGBP05060 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.92■□□□□ 0.46
CHGBP05060 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.92■□□□□ 0.46
CHGBP05060 ZACNP1-201ENST00000612259 710 ntBASIC17.92■□□□□ 0.46
CHGBP05060 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.92■□□□□ 0.46
CHGBP05060 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.92■□□□□ 0.46
CHGBP05060 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.92■□□□□ 0.46
CHGBP05060 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.92■□□□□ 0.46
CHGBP05060 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CHGBP05060 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.92■□□□□ 0.46
CHGBP05060 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.92■□□□□ 0.46
CHGBP05060 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHGBP05060 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms