Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.7□□□□□ -0.22
P04436 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.7□□□□□ -0.22
P04436 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.7□□□□□ -0.22
P04436 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
P04436 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
P04436 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
P04436 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.7□□□□□ -0.22
P04436 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
P04436 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
P04436 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.7□□□□□ -0.22
P04436 AC004945.1-201ENST00000416738 983 ntBASIC13.7□□□□□ -0.22
P04436 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
P04436 TLE1P1-201ENST00000422965 589 ntBASIC13.7□□□□□ -0.22
P04436 GOLGA2P4-201ENST00000441462 777 ntBASIC13.7□□□□□ -0.22
P04436 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.7□□□□□ -0.22
P04436 AC108725.1-201ENST00000495472 409 ntBASIC13.7□□□□□ -0.22
P04436 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.7□□□□□ -0.22
P04436 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.7□□□□□ -0.22
P04436 FAM8A2P-201ENST00000528813 1142 ntBASIC13.7□□□□□ -0.22
P04436 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
P04436 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.7□□□□□ -0.22
P04436 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.7□□□□□ -0.22
P04436 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.7□□□□□ -0.22
P04436 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.7□□□□□ -0.22
P04436 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.7□□□□□ -0.22
P04436 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.7□□□□□ -0.22
P04436 MIR6869-201ENST00000619434 62 ntBASIC13.7□□□□□ -0.22
P04436 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.7□□□□□ -0.22
P04436 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.7□□□□□ -0.22
P04436 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.7□□□□□ -0.22
P04436 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.7□□□□□ -0.22
P04436 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.7□□□□□ -0.22
P04436 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
P04436 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.69□□□□□ -0.22
P04436 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.69□□□□□ -0.22
P04436 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.69□□□□□ -0.22
P04436 SALL4P5-201ENST00000419001 1760 ntBASIC13.69□□□□□ -0.22
P04436 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 ZBED1P1-201ENST00000502364 1930 ntBASIC13.69□□□□□ -0.22
P04436 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.69□□□□□ -0.22
P04436 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.69□□□□□ -0.22
P04436 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.69□□□□□ -0.22
P04436 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.69□□□□□ -0.22
P04436 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.69□□□□□ -0.22
P04436 AP003171.2-201ENST00000528208 925 ntBASIC13.69□□□□□ -0.22
P04436 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.69□□□□□ -0.22
P04436 AC138696.2-201ENST00000607376 223 ntBASIC13.69□□□□□ -0.22
P04436 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.69□□□□□ -0.22
P04436 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.69□□□□□ -0.22
P04436 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.69□□□□□ -0.22
P04436 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.69□□□□□ -0.22
P04436 AC002472.3-201ENST00000640124 621 ntBASIC13.69□□□□□ -0.22
P04436 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.69□□□□□ -0.22
P04436 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.69□□□□□ -0.22
P04436 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
P04436 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
P04436 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 AC011840.2-201ENST00000563063 1520 ntBASIC13.69□□□□□ -0.22
P04436 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P04436 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04436 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04436 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04436 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.68□□□□□ -0.22
P04436 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
P04436 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04436 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04436 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04436 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.68□□□□□ -0.22
P04436 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
P04436 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
P04436 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms