Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 AC079140.1-201ENST00000508039 487 ntBASIC12.98□□□□□ -0.33
HLA-DQB1P01920 SLED1-202ENST00000512051 380 ntBASIC12.98□□□□□ -0.33
HLA-DQB1P01920 BANF1P1-201ENST00000553684 263 ntBASIC12.98□□□□□ -0.33
HLA-DQB1P01920 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 RARRES2P9-201ENST00000565168 469 ntBASIC12.98□□□□□ -0.33
HLA-DQB1P01920 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 BX640515.1-201ENST00000617215 977 ntBASIC12.98□□□□□ -0.33
HLA-DQB1P01920 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 RN7SL832P-201ENST00000607781 1756 ntBASIC12.98□□□□□ -0.33
HLA-DQB1P01920 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 AC131902.2-201ENST00000566892 2172 ntBASIC12.98□□□□□ -0.33
HLA-DQB1P01920 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 NCLP1-201ENST00000445357 1963 ntBASIC12.98□□□□□ -0.33
HLA-DQB1P01920 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HLA-DQB1P01920 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 AL360270.3-201ENST00000609118 1348 ntBASIC12.97□□□□□ -0.33
HLA-DQB1P01920 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 KRT18P64-201ENST00000434946 1219 ntBASIC12.97□□□□□ -0.33
HLA-DQB1P01920 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 KRT8P48-201ENST00000515599 1220 ntBASIC12.97□□□□□ -0.33
HLA-DQB1P01920 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 AC011840.2-201ENST00000563063 1520 ntBASIC12.97□□□□□ -0.33
HLA-DQB1P01920 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DQB1P01920 CLK3P2-201ENST00000427566 1453 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms