Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TIMP1P01033 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TIMP1P01033 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TIMP1P01033 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.9■□□□□ 0.14
TIMP1P01033 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.9■□□□□ 0.14
TIMP1P01033 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TIMP1P01033 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TIMP1P01033 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TIMP1P01033 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
TIMP1P01033 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.89■□□□□ 0.13
TIMP1P01033 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 PRAL-201ENST00000624952 3286 ntBASIC15.89■□□□□ 0.13
TIMP1P01033 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TIMP1P01033 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC15.89■□□□□ 0.13
TIMP1P01033 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.89■□□□□ 0.13
TIMP1P01033 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.89■□□□□ 0.13
TIMP1P01033 RN7SL277P-201ENST00000481521 288 ntBASIC15.89■□□□□ 0.13
TIMP1P01033 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.89■□□□□ 0.13
TIMP1P01033 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.89■□□□□ 0.13
TIMP1P01033 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.89■□□□□ 0.13
TIMP1P01033 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TIMP1P01033 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.89■□□□□ 0.13
TIMP1P01033 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TIMP1P01033 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TIMP1P01033 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.89■□□□□ 0.13
TIMP1P01033 TEKT4P2-202ENST00000559466 1312 ntBASIC15.89■□□□□ 0.13
TIMP1P01033 MRPL37P1-201ENST00000592451 1337 ntBASIC15.89■□□□□ 0.13
TIMP1P01033 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.89■□□□□ 0.13
TIMP1P01033 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TIMP1P01033 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.89■□□□□ 0.13
TIMP1P01033 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.89■□□□□ 0.13
TIMP1P01033 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TIMP1P01033 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.89■□□□□ 0.13
TIMP1P01033 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.89■□□□□ 0.13
TIMP1P01033 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TIMP1P01033 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.89■□□□□ 0.13
TIMP1P01033 LINC02199-201ENST00000506655 2702 ntBASIC15.88■□□□□ 0.13
TIMP1P01033 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 AL590440.2-201ENST00000641973 1595 ntBASIC15.88■□□□□ 0.13
TIMP1P01033 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 COX20P1-201ENST00000366529 357 ntBASIC15.88■□□□□ 0.13
TIMP1P01033 MIR645-201ENST00000385283 94 ntBASIC15.88■□□□□ 0.13
TIMP1P01033 ST13P19-201ENST00000442505 1124 ntBASIC15.88■□□□□ 0.13
TIMP1P01033 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC15.88■□□□□ 0.13
TIMP1P01033 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.88■□□□□ 0.13
TIMP1P01033 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.88■□□□□ 0.13
TIMP1P01033 DGAT2L7P-201ENST00000602462 744 ntBASIC15.88■□□□□ 0.13
TIMP1P01033 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.88■□□□□ 0.13
TIMP1P01033 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.88■□□□□ 0.13
TIMP1P01033 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.88■□□□□ 0.13
TIMP1P01033 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.88■□□□□ 0.13
TIMP1P01033 AC006372.4-201ENST00000624122 1543 ntBASIC15.88■□□□□ 0.13
TIMP1P01033 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.88■□□□□ 0.13
TIMP1P01033 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TIMP1P01033 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TIMP1P01033 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TIMP1P01033 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TIMP1P01033 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.87■□□□□ 0.13
TIMP1P01033 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.87■□□□□ 0.13
TIMP1P01033 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TIMP1P01033 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC15.87■□□□□ 0.13
TIMP1P01033 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.87■□□□□ 0.13
TIMP1P01033 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TIMP1P01033 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TIMP1P01033 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TIMP1P01033 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms