Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
PPP1R3DO95685 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PPP1R3DO95685 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PPP1R3DO95685 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
PPP1R3DO95685 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PPP1R3DO95685 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.62□□□□□ -0.23
PPP1R3DO95685 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PPP1R3DO95685 AC136759.1-202ENST00000530858 2194 ntBASIC13.62□□□□□ -0.23
PPP1R3DO95685 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PPP1R3DO95685 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.62□□□□□ -0.23
PPP1R3DO95685 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PPP1R3DO95685 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.62□□□□□ -0.23
PPP1R3DO95685 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PPP1R3DO95685 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
PPP1R3DO95685 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PPP1R3DO95685 AL354702.1-201ENST00000442006 1960 ntBASIC13.62□□□□□ -0.23
PPP1R3DO95685 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
PPP1R3DO95685 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 AC152010.1-201ENST00000415779 2006 ntBASIC13.61□□□□□ -0.23
PPP1R3DO95685 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 AL928921.2-201ENST00000641325 2442 ntBASIC13.61□□□□□ -0.23
PPP1R3DO95685 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 METTL21AP1-201ENST00000438852 635 ntBASIC13.61□□□□□ -0.23
PPP1R3DO95685 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 AC026410.3-201ENST00000514280 936 ntBASIC13.61□□□□□ -0.23
PPP1R3DO95685 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 RARRES2P5-201ENST00000564013 466 ntBASIC13.61□□□□□ -0.23
PPP1R3DO95685 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 AC004790.1-201ENST00000612686 536 ntBASIC13.61□□□□□ -0.23
PPP1R3DO95685 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 AC022144.1-201ENST00000602255 1580 ntBASIC13.61□□□□□ -0.23
PPP1R3DO95685 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 KRT18P28-201ENST00000453838 1332 ntBASIC13.61□□□□□ -0.23
PPP1R3DO95685 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
PPP1R3DO95685 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PPP1R3DO95685 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PPP1R3DO95685 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.6□□□□□ -0.23
PPP1R3DO95685 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.6□□□□□ -0.23
PPP1R3DO95685 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP1R3DO95685 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PPP1R3DO95685 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP1R3DO95685 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP1R3DO95685 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP1R3DO95685 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP1R3DO95685 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
PPP1R3DO95685 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP1R3DO95685 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
PPP1R3DO95685 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.6□□□□□ -0.23
PPP1R3DO95685 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP1R3DO95685 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PPP1R3DO95685 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PPP1R3DO95685 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms