Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
SIX6O95475 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.61□□□□□ -0.39
SIX6O95475 AP002414.3-201ENST00000589352 1468 ntBASIC12.61□□□□□ -0.39
SIX6O95475 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.61□□□□□ -0.39
SIX6O95475 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SIX6O95475 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.61□□□□□ -0.39
SIX6O95475 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.61□□□□□ -0.39
SIX6O95475 RNA5SP410-201ENST00000516285 106 ntBASIC12.61□□□□□ -0.39
SIX6O95475 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.61□□□□□ -0.39
SIX6O95475 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.61□□□□□ -0.39
SIX6O95475 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.61□□□□□ -0.39
SIX6O95475 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.61□□□□□ -0.39
SIX6O95475 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.61□□□□□ -0.39
SIX6O95475 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.61□□□□□ -0.39
SIX6O95475 CLEC4GP1-201ENST00000596555 870 ntBASIC12.61□□□□□ -0.39
SIX6O95475 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 AC005593.1-201ENST00000624894 515 ntBASIC12.61□□□□□ -0.39
SIX6O95475 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SIX6O95475 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.61□□□□□ -0.39
SIX6O95475 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SIX6O95475 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SIX6O95475 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.61□□□□□ -0.39
SIX6O95475 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SIX6O95475 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.6□□□□□ -0.39
SIX6O95475 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 AC106818.1-201ENST00000623223 3242 ntBASIC12.6□□□□□ -0.39
SIX6O95475 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
SIX6O95475 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SIX6O95475 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.6□□□□□ -0.39
SIX6O95475 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
SIX6O95475 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.6□□□□□ -0.39
SIX6O95475 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.6□□□□□ -0.39
SIX6O95475 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.6□□□□□ -0.39
SIX6O95475 AC004945.1-201ENST00000416738 983 ntBASIC12.6□□□□□ -0.39
SIX6O95475 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.6□□□□□ -0.39
SIX6O95475 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 AL139010.1-201ENST00000454878 894 ntBASIC12.6□□□□□ -0.39
SIX6O95475 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.6□□□□□ -0.39
SIX6O95475 MIR4751-201ENST00000578027 74 ntBASIC12.6□□□□□ -0.39
SIX6O95475 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.6□□□□□ -0.39
SIX6O95475 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
SIX6O95475 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.6□□□□□ -0.39
SIX6O95475 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SIX6O95475 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.6□□□□□ -0.39
SIX6O95475 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.6□□□□□ -0.39
SIX6O95475 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.6□□□□□ -0.39
SIX6O95475 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.6□□□□□ -0.39
SIX6O95475 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SIX6O95475 PCDHA5-203ENST00000614258 4248 ntBASIC12.6□□□□□ -0.39
SIX6O95475 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SIX6O95475 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
SIX6O95475 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.59□□□□□ -0.39
SIX6O95475 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 AC020910.6-201ENST00000623084 1459 ntBASIC12.59□□□□□ -0.39
SIX6O95475 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SIX6O95475 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms